Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tako6g03046 | ATGCTAAGCATCAATGGTGAGCATCATGGGTATTTTGATGGAATGAGGGGGCTAAGACAAGGGTGCCCTCTCTCTCCATATTTATTTACTCTTGTTATCGAAGTTTTTAATCTCATGTTTAAAAGAAGGATTGAAGAAGAAGGTGGATTCAAATACCACTGGCGAAGCAAAGAGCAAAAGCTAAGTCACTTGAGTTTTGTGGATGATCTCATGATCTTCTGTTATGGGAACAAGGCATCTTTTCGGATCATCAAGGACTCTTTGGAAGTATTTGCTAAAGTTGCTGGATTAAAGCCTAACTTGCTCAAAAGTAATGTCAAAGAAACTGTTCAGAAGGATCTGCTGGGAATTCTTCCTTTTGCTGTTGGAAAACTTCCTATGAGGTATTTGGGAGTGCCTTTAATTTCAACAAAATTGTTTGTAAAAGATTGTAAAAGTTTGGTTGATAAAGTGAAGAAAAGAGTCAAGAGTTGGGAGAATAAATCTCTTTCATATGCTGGCAGACTGCAACTGATATCTTCTGTCTTGGAGAGATACAATATCAAGGACAAAGTGAAAGATTTTCTTAGTGATAGAAGTTGGTGCTGGACAGAGAGTTGGGTTTCTCTTATTCCCGAACTATTGGATCACCCTGTTCTAGCCTTATCTGTTTCTAAGCATGATGTTCTAAAATGGTGCAAAAATAATGGTGATGTGGTTGATTTTAGTACTCAGCAGGTGTGGAAGGACACTCAAAGTCTGGTTCCTAAGTTGAATGGTGTTGTCTGGTTTGCGGGTCATTTTTTTGGGGACCATTCCTGCGAAATTTTCTGGGACTGTGGGTTGTACCGTTTTCTGCATGCTGTGGGCAGAAATGTGGTTCAAAGAGGAACATGGCAGCAGGGGGTGCCGGAACTGCAAAAATATTTGGCTGGTGTCAGAGAGGCTTATGGTGATCAGATGGCTGCAGCAAAATCTATGAGGGTGCTATATCATCTGACTGTCAAGGAGTTAAGGAATAAGTCAAGGGATAGTCAACAGGTGCAGAGGGTATATGAGAGTGATTTGTATCACTCTCAATTGTTTAGAGTGTGTTCTCAGCTGGGCATTATTTTTGCAGTCCTGTGTTCTGCTATCCGCACATTTTTGGCACAGCGAAGTGCAAAGGAGCTGGTAACGACAGCAGGCTCCCAAGGCCCCAAGGTCACTCCATTTGGTACTGACCCTGATGAAACCGGGCTCTACAGAGCGTCGGGGTGTGTGTCTTTCATTCGTAAGCCTATCAGTCACTTAGGTGATCTTTTGTGGTGTGATGATGTGATGCATATTAAGAGGATGAGGCTTGTGCACCGAGGCTATATTCTGATGATTCTGAGGACTTATGATGATGATGATGATTCTATTGTGCATGTTCTTATTATTGGTCATCTGCGATACACAGGTGCACAGTCCAGTCCAACTGATAGGCTTAATGGGCGAGATCCAGATGATATACCTCGTATTCCTGGGTTCATTCCAGGCCCTGGACTTGGATTTTGGCCTAGATTGGCTGGGTTTCAGACCTTACAGTTTAGGAGGGCACTGCCATTTTTCCAAAAAAAAAAAAAAAAACAACCGAGTGTTCCTCACAAGAACGAAAGGGCTATGGTGGCTCAGCAGTTCACATGGGACGATCAACTGTTGGCGCTGAACCTGACAAATGAAAGAGCAGCGAACCTGGCTCAGATTGAGGAAACTGAAGAGGCAGACCAAGCTAAAGACAACATGAAGGATTTGCAGTTCACCTTCATGGTCTCTACCACCCCTGAAACGAAAGAGTGGATCATGGATTCAGAAGACATGACATCATGGAAAGTCATGCTCAAAACCCCCGCATCCATCGTCCTAATCATGTACACCTTCATATCAGTCTGGCTTGTTGGCGACCTTACCGCCTTCCATCTCTATCTCATCACTACAAATCAGACGACATATGAGAACTTCAGATACCGGTACGATAGGCGGGCGAACCCGTACAATAAAGGAGTGGTGGACAATTTTGGGGAAATCTTCGGCACAAGCATCCAGGAATCAAAGAACAAGTTTCGGGCACACGTACCTAAAGAACCAGGTCTCGGTGCCCGATCCGTGGGCGGGTTTGTGTCTCCAAACATGGGGAAAGCGGTAGAGGATATTGAAATGGGGCGGAAGGCGGTGTGGAGGGACAGTGGTGCCGAAGTCGATAGCCAGTTCAGCGATAAAGAGGTTGGAATTGGCGGTGAAATGTCACCGGAGATAAGAACGCAAGTGGATGAGGGAGATCGCGCGAATATTGGCCACACGAGAAGGTCCAGTTGGGGGAGGAAAAGCGGGAGCTGGGAAATGTCGCTAGGAAATAGCTCTAAAATTCGGATCAATCATCAGGAATTAAGCATTTTCGGAATTGTTCTTCAAGCTGTTCATCAGGATCATACAATTTCGGCCAGCTCCAAATGGATCCCTCGTCTAGCATCTGCTGATGGTTTCTCGAAATGGAAATTCCGTATCGAGAAACACATCAAGTTTGCTAGTCCTAGAGTCTGGCGTAGCATGATGCGTGGTCCAGTTCAGATAAATGTTAAAAACACAGCCACTGGCGCTGTTACTCCAAAACTCATGGAGGACTACACAGACGACGACTTCGAGAAGGTTGAGGAAGATGAGAAGGCGTTGGCAATTCTCACCATGGCACTGACTCCAGAAATTGCTCAAGGGTTCTGA | 2718 | 44.85 | MLSINGEHHGYFDGMRGLRQGCPLSPYLFTLVIEVFNLMFKRRIEEEGGFKYHWRSKEQKLSHLSFVDDLMIFCYGNKASFRIIKDSLEVFAKVAGLKPNLLKSNVKETVQKDLLGILPFAVGKLPMRYLGVPLISTKLFVKDCKSLVDKVKKRVKSWENKSLSYAGRLQLISSVLERYNIKDKVKDFLSDRSWCWTESWVSLIPELLDHPVLALSVSKHDVLKWCKNNGDVVDFSTQQVWKDTQSLVPKLNGVVWFAGHFFGDHSCEIFWDCGLYRFLHAVGRNVVQRGTWQQGVPELQKYLAGVREAYGDQMAAAKSMRVLYHLTVKELRNKSRDSQQVQRVYESDLYHSQLFRVCSQLGIIFAVLCSAIRTFLAQRSAKELVTTAGSQGPKVTPFGTDPDETGLYRASGCVSFIRKPISHLGDLLWCDDVMHIKRMRLVHRGYILMILRTYDDDDDSIVHVLIIGHLRYTGAQSSPTDRLNGRDPDDIPRIPGFIPGPGLGFWPRLAGFQTLQFRRALPFFQKKKKKQPSVPHKNERAMVAQQFTWDDQLLALNLTNERAANLAQIEETEEADQAKDNMKDLQFTFMVSTTPETKEWIMDSEDMTSWKVMLKTPASIVLIMYTFISVWLVGDLTAFHLYLITTNQTTYENFRYRYDRRANPYNKGVVDNFGEIFGTSIQESKNKFRAHVPKEPGLGARSVGGFVSPNMGKAVEDIEMGRKAVWRDSGAEVDSQFSDKEVGIGGEMSPEIRTQVDEGDRANIGHTRRSSWGRKSGSWEMSLGNSSKIRINHQELSIFGIVLQAVHQDHTISASSKWIPRLASADGFSKWKFRIEKHIKFASPRVWRSMMRGPVQINVKNTATGAVTPKLMEDYTDDDFEKVEEDEKALAILTMALTPEIAQGF | 905 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tako6g03046 | 905 | PANTHER | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED | 3 | 178 | IPR052343 | - | |
| Tako6g03046 | 905 | SUPERFAMILY | DNA-RNA polymerases | 15 | 199 | IPR043502 | - | |
| Tako6g03046 | 905 | ProSiteProfiles | Reverse transcriptase (RT) catalytic domain profile. | 1 | 134 | IPR000477 | - | |
| Tako6g03046 | 905 | Coils | Coil | 141 | 161 | - | - | |
| Tako6g03046 | 905 | Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) | 11 | 133 | IPR000477 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tako6g03046 | - | - |