AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako6g03056 ATGGCTGTCAAGACAGCAGTGCAGTTCTCCGACGTGCCCCTTCTCGATCAGGTCAATGAGACCGCCACATTGTCCCTTTACGCCACCCGTGTGGCCACCTCCGGAGTGGAGGTGAACAATATCCGGAAAAATCTGCCGAAATTCATGGTGGTCGGTCACAGAGGTCATGGCATGAACGTGTTGCTATCCACGGACAAGAGGATGAACGCTTTTAAAGAAAACTCCATTCTTTCATTCAATAACGCTGCCAATTATCCTCTTGATTTCATAGAATTCGACGTTCAGGTGACAAAAGACGACATACCCATCATTTTCCACGACAATTTCATCCTCTCTGAAGAAAACGGTGCCGTAGTTGAGACGAGAGTTACTGATCTGACAGTTGATGAGTTCTTTAGCTATGGCCCTCAAAGAGTAGTAGGTCAGGTGGGCAAAACTTTGGTGAGAGAATCGAACGGACGGATTGTCGGGTGGCAGGTTGACACCGATGATCATTCCTGTACTTTACAAGAAGCTTTCGAAAAAGTAAACCCTTGTTTGGGATTCAACATCGAGTTGAAATTCGACGATTACATTGTCTATGAAGAAGAAACTCTCGTCCACGCTCTTCAAGTCATCATGAAGGTGGTATACGAATTCGCGAAAGACAGACCTGTAATGTTTTCAAGCTTCCAGCCCGATGCCGCCTTGCTAATGAAGAAACTTCAGACGGCATACCCAGTTTACTTCTTGACAAACGGAGGAACCGAGATATTCGATGATGTTCGAATGAATTCACTGGAAGATGCCAAGAAGATGGCAATCGAGGGTAAATTGGATGGAATCGTTTCGGAAGTTTTGGGTATTTTCAGAAACCCTTCGGTCGTAAGAGAAATCAAAGAATCAAACCTTTCCCTCTTTACTTACGGCAAATTGAACAATGTCCCTGAAGCCGTACAAGTTCAATACCTAATGGGCGTAGAGGGCGTGATTGTCGATCTGATTCAAGAAATCACAACTTCGGTTGCACATATAAAGACGACAAAGGCGTACAGCGAGAACGAGAAGAAGAAGTTGGCCATCGAAGGGAAGGAAGGCGAATTACAGGTGAAGGAGATCACCGACAAAGTTGAATTGACATTTCTGTTGAACTTGATTTCCCAAGTGGCTCAACAGGGATAG 1161 45.05 MAVKTAVQFSDVPLLDQVNETATLSLYATRVATSGVEVNNIRKNLPKFMVVGHRGHGMNVLLSTDKRMNAFKENSILSFNNAANYPLDFIEFDVQVTKDDIPIIFHDNFILSEENGAVVETRVTDLTVDEFFSYGPQRVVGQVGKTLVRESNGRIVGWQVDTDDHSCTLQEAFEKVNPCLGFNIELKFDDYIVYEEETLVHALQVIMKVVYEFAKDRPVMFSSFQPDAALLMKKLQTAYPVYFLTNGGTEIFDDVRMNSLEDAKKMAIEGKLDGIVSEVLGIFRNPSVVREIKESNLSLFTYGKLNNVPEAVQVQYLMGVEGVIVDLIQEITTSVAHIKTTKAYSENEKKKLAIEGKEGELQVKEITDKVELTFLLNLISQVAQQG 386
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako6g03056 386 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 23 340 IPR051578 GO:0046475(PANTHER)
Tako6g03056 386 Gene3D Phosphatidylinositol (PI) phosphodiesterase 33 337 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Tako6g03056 386 ProSiteProfiles GP-PDE domain profile. 48 335 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Tako6g03056 386 Pfam Glycerophosphoryl diester phosphodiesterase family 53 328 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Tako6g03056 386 FunFam Glycerophosphodiester phosphodiesterase GDPD2 39 337 - -
Tako6g03056 386 SUPERFAMILY PLC-like phosphodiesterases 46 329 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako6g03056 K18696 glycerophosphodiester phosphodiesterase [EC:3.1.4.46]