AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako6g03058 ATGAAGTCATCACTGGGGAAACTCGGTAGGAAATTATCTTTACAGAAGAGCGATGTGAAGGAGACAAGGGATCATCAGCCTTCCGCCCATATAGACGAGATTGCTCAAGCTTCAAAGGATATGCAAGATATGCGAAACTGCTATGATGGTTTATTATCTGCAGCAGCTGCAACAGCAAATAGTATATACGAATTTTCGGAGTCACTAAATGAAATGGGGAGCTGTTTGCTAGGGAAAACCGGTGCTGATGCTGATGGTGAAAGTGGAAAAATGCTATCAACTTTAGGGGATATGCAATTGGAACTTCAGAAAATTGCTGATACATATCGATCTGATGTGGTTGTGACAATCACCAACCCCTCAGAGTCTCTCCTTAGTGAGCTACGGAAAGTGGAGGAAATGAAACTTCAGTGTGATGAAAAAAGGGAGGTGTATGAGTACATGATGGCACAACAAAGAGAGAAGGGGAAATTAAGGAATGGAAAAGTTGACCAAAAACTAAAAGAAGCTCAAGAGGAATTTGATGAGGCAGCAAGGCTTTGTGTTTTTAGGGTGAAGTCACTTAAAGAGGGACAATGTCGTAGTCTTTTAACCCAAGCTGCCCGACATCATGCTGCCCAGGTGAATTTTTTTCGGAAGGGACTTAAAGTTCTAGAAGCAGTGGAACCTTCCATAAGAAATGTTGCGGAAAAACATCGGATTGATTACCAAATAAGTGGATTATATGATGAGGGAGGTGAACCCATGAGTGGATATGAAAGCACAGATGATGGAGAATTAAGTTTTGATTATAATAAACAGAAGAAACACGTTCTTGATGATGATGATGGCAGCTCACCCAATCCAATGGAGCTGGACCAGGTGGACTTTCCAAATCTAGAGGATTCAGAGATAAATCGGAATAAACAAGTTTTTGGTAGGCAACCAAGAGTAAGCAGCTATTCGGCCCCTCTATTCCCCGACAAAATCGACACATCAGAAAAACCAAAAGGATCACAACCACCACGCAAATTCTACTCTTATGTCCTTCCTCCTCCCACTATCGACACCCGGAATCCCAATTCCAGACCACCCTCCAATTCCATTCCATTCCAACCTCCAATTCCATCCGACACCGATTCCAATTCCAATTCCGCCACCCAACTACCCGCCCCAATCAAATCCGACGACAAAGTAGCCCAACGACAATCCTATTCCGGCCCGTTACCACCAAGCCGACAATTCTCGTTCAACATCGCGTCCACTAGCGGCCCCACCACTTCCGAGCTTCCACAACCGCCGTCGCGGATTCCGGTGGCGGCTCAGCCTTCCCGGAGTGCATCGCCGCCGCCCATCTCCTCACCTAAAATAAGCGAGCTTCATGAGCTTCCAAGGCCTCCCACTAATCTACCATTTTCTAAATCGGGTGCTAATAATAATGTGAGTAGACATTCGGCTCCTTTGTATTCCAAGAATCAAGAAAGTTTACCGCCAAATAAACGCGCGATGTTGTCATCGATTTCCGCGTCCCCACTTCCACTCCCGCCTTTGGTTGTTCCCAGAAGCTTTTCCATTCCCTCCAAGGGAAATGACGTTAATGCCCTTGGGTAA 1590 45.47 MKSSLGKLGRKLSLQKSDVKETRDHQPSAHIDEIAQASKDMQDMRNCYDGLLSAAAATANSIYEFSESLNEMGSCLLGKTGADADGESGKMLSTLGDMQLELQKIADTYRSDVVVTITNPSESLLSELRKVEEMKLQCDEKREVYEYMMAQQREKGKLRNGKVDQKLKEAQEEFDEAARLCVFRVKSLKEGQCRSLLTQAARHHAAQVNFFRKGLKVLEAVEPSIRNVAEKHRIDYQISGLYDEGGEPMSGYESTDDGELSFDYNKQKKHVLDDDDGSSPNPMELDQVDFPNLEDSEINRNKQVFGRQPRVSSYSAPLFPDKIDTSEKPKGSQPPRKFYSYVLPPPTIDTRNPNSRPPSNSIPFQPPIPSDTDSNSNSATQLPAPIKSDDKVAQRQSYSGPLPPSRQFSFNIASTSGPTTSELPQPPSRIPVAAQPSRSASPPPISSPKISELHELPRPPTNLPFSKSGANNNVSRHSAPLYSKNQESLPPNKRAMLSSISASPLPLPPLVVPRSFSIPSKGNDVNALG 529
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako6g03058 529 SUPERFAMILY BAR-IMD domain-like 33 226 IPR027267 -
Tako6g03058 529 Gene3D Arfaptin homology (AH) domain-BAR domain 26 237 IPR027267 -
Tako6g03058 529 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 375 525 IPR037488 -
Tako6g03058 529 MobiDBLite consensus disorder prediction 366 384 - -
Tako6g03058 529 MobiDBLite consensus disorder prediction 392 423 - -
Tako6g03058 529 CDD BAR 40 224 - -
Tako6g03058 529 MobiDBLite consensus disorder prediction 270 507 - -
Tako6g03058 529 Pfam BAR domain of APPL family 30 231 IPR004148 GO:0005515(InterPro)|GO:0005737(InterPro)
Tako6g03058 529 Coils Coil 160 180 - -
Tako6g03058 529 MobiDBLite consensus disorder prediction 1 30 - -
Tako6g03058 529 MobiDBLite consensus disorder prediction 13 30 - -
Tako6g03058 529 MobiDBLite consensus disorder prediction 464 499 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako6g03058 - -