AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02114 ATGCGCCGGCCGAATCTGCCGGAGTTAAATAGAGGATATGCTATTAGCTTCACCGGAGCGCGAAAGCTGGTGACGAGAAACGAATTAAAGCCGATCATGTTGCTTCACAATTGGACCTTTTCTTCTACTTCTTCTTCTTCTTCTTCCCGGTTGCTACATTCCGCAAGTCAAACCAGCAGAATTGATTACGAAACTACTAGTGTCTACTCGAGAAGGAGAAAAATCAAAGTATCTTCATCACTTGCGTCGTTCCAAGCTGGAACGGATGTAATCGCTGATATTGCTCACAATAAGGTGCTGATTTCGGCAGCTGCCTGTGCTGCAATTGGACAGTTGACAAAGCCTTTCACTGCTTCCATTTTATATCAAAGAGCTTTTGATCCAAAAGTTGCACTTCAGGCTGGAGGCTTTCCTTCAACTCATTCTTCTGCTGCTGTGGCATCTGCAATGTCACTTGGCCTGGAAAGGGGTTTCTCTGATTCAATTTTTGGACTAGCGGTTGTGTATGCTTGTCTTACCATGTATGATGCCCAGGGTGTTAGAAGGGAAGTTGGAGTTCATGCAAAAACACTAAACAAAGTATTAACCACCACAAACCAATCCAAAAAACCCTTATCAAATCAAGAATCCATCAAGTTTGATGAAACAACTACTTGCATGCAAGATTTTCACAAAGAAACGGTTGTTCTAACACCCGATAAAATCACAAAAGAATCAGAAAATGTTTCTGTTTCTGGTTCACTCAAAGAATCAATCGGTCACACGGAAATTGAAGTGGCTGCAGGTGCTTTGTTGGGTTTACTTGGAACCTTAGCTGTCTACTCCTTATGA 831 42.36 MRRPNLPELNRGYAISFTGARKLVTRNELKPIMLLHNWTFSSTSSSSSSRLLHSASQTSRIDYETTSVYSRRRKIKVSSSLASFQAGTDVIADIAHNKVLISAAACAAIGQLTKPFTASILYQRAFDPKVALQAGGFPSTHSSAAVASAMSLGLERGFSDSIFGLAVVYACLTMYDAQGVRREVGVHAKTLNKVLTTTNQSKKPLSNQESIKFDETTTCMQDFHKETVVLTPDKITKESENVSVSGSLKESIGHTEIEVAAGALLGLLGTLAVYSL 276
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02114 276 Pfam Divergent PAP2 family 96 267 IPR003832 -
Tamo4g02114 276 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 79 275 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02114 K09775 uncharacterized protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:34360377 Tamo7g04278 Tamo-Chr7:86511291 dispersed
Tamo Tamo-Chr4:34360377 Tamo6g00691 Tamo-Chr6:8914664 transposed