AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02123 ATGAACAAATTGGGCAGAGGACACCGTGACAAGGTTCAACAGTTCATGACAATTACTGGTGCAAGTGAAAAGGTTGCTCTTCAAGCCTTGAAGGCAAGTGATTGGCATCTTGATGGAGCATTTGATGTATTCTACAGTCAACCTCACCCAAAATCATTCACAGATACAAGACATTTAGAGGAAATGTACAATAAATACAAAGATCCTTATGCTGATATGATTATGGCTGATGGTATCAGCAACCTCTGCAATGACCTTCAGGTGGATCCACAGGATATTGTTATGTTGGTTGTTTCTTGGCACATGAAGGCTGCTACCATGTGTGAATTCTCAAAGCAAGAATTTGTTGGTGGCTTGCAGTCTCTTGGGATTGATTCACTTGAGAAGTTCCGTGAACGGATACCATTTATGCGTTCTGAACTCAACGATGACCAAAAATTCAAGGAGATTTATATTTTTGCATTCGGCTGGGCAAAAGAGAAGGGTCAAAAGTCTCTTGCATTAGATACAGCAATAGGAATGTGGCAATTATTGTTTGAAGAAAAAGAATGGCCATTAGTTGATCATTGGTGCCAATTCTTACAGGCACGTCATAATAAAGCAATCTCTCGTGACACTTGGTCTCAGCTTCTTGAATTTGCAAGAAGTGTGGACCCCACATTGGCTAGCTATGATGCAGCGGGTGCATGGCCTTATCTAATTGATGAATTTGTAGAGTATTTGATAGAGAACGGGATAACTGAAAAGGGAAGTGTCAAGTAA 762 40.55 MNKLGRGHRDKVQQFMTITGASEKVALQALKASDWHLDGAFDVFYSQPHPKSFTDTRHLEEMYNKYKDPYADMIMADGISNLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFVGGLQSLGIDSLEKFRERIPFMRSELNDDQKFKEIYIFAFGWAKEKGQKSLALDTAIGMWQLLFEEKEWPLVDHWCQFLQARHNKAISRDTWSQLLEFARSVDPTLASYDAAGAWPYLIDEFVEYLIENGITEKGSVK 253
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02123 253 Gene3D - 53 142 - -
Tamo4g02123 253 FunFam Defective in cullin neddylation protein 6 47 - -
Tamo4g02123 253 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
Tamo4g02123 253 CDD UBA-DCNL 8 48 - -
Tamo4g02123 253 Pfam Cullin binding 130 240 IPR005176 -
Tamo4g02123 253 Gene3D Cullin, PONY binding domain 143 251 IPR042460 -
Tamo4g02123 253 FunFam Defective in cullin neddylation protein 53 142 - -
Tamo4g02123 253 FunFam Defective in cullin neddylation protein 143 248 - -
Tamo4g02123 253 Pfam UBA-like domain 9 47 - -
Tamo4g02123 253 PANTHER RP42 RELATED 24 242 IPR014764 GO:0000151(PANTHER)|GO:0031624(PANTHER)|GO:0032182(PANTHER)|GO:0045116(PANTHER)|GO:0097602(PANTHER)
Tamo4g02123 253 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515(InterPro)
Tamo4g02123 253 Gene3D - 6 47 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02123 K17822 DCN1-like protein 1/2