Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g02275 | ATGGCGGAAACTGAAGGAAGGCATGCACGAAAAATGTCGATGAAGGGAAGCATTGAAGTTGGAAAGGAGAAATGGGCGAAGCATTACTCTTCAAATCACCAGATATTGTTGGTTGGAGAAGGAGATTTCTCTTTTGCTTTGAGTTTGGCTACATCTTTTGGATCTGCTTCCAACATTGTAGCAACTTCTCTGGATTCTTATGATATTGTTATCAAGAAATACAAGAGAGCAAAAACAAACTTGAAAATCTTGGATAATTTTGGAGCTCAACTATTGCACGGAGTTGATTCAACCCGAATGAAGCTTCACCATGATCTTCGAATGCGGAAATTTGACCGCATTGTATATAATTTCCCACATGCCGGCTTTGTAGGGAAAGAAAGTGATCGCTTGGTCATCATGATGCATAGAAGTTTGGTTCGTGGTTTTTTAAGGAACGCAAGCGGCATGTTGCGTGTAAACGGTGAAGTCCATGTGTCTCACAAGACTGTATGCCCATTTTATTGTTGGAATATCGAAGAATTAGCGAATCAAAGTTGTTTAAAATTGCTCGAATGTGTCGATTTCAAGATTAAAGATTATCCTGGTTACAACAACAAAAGAGGAGATGGTAAGAAACCAGATCAATCATTTCCTCTAGGAAAGTGCAAGACATTTAAATTCATATTGTCTTCAAAAGCCATGAAATCAACCCGATCAAGAATGATGAAGAGCACGGAATGCTTTCGGATTTTCAGGGAGTATTTCAATCATGAATGTTTGGTATGTGAGCAAGGTGATAACTATATTCCTTATTCTTTTACGAACATGCTCAAAATCGGGTTTGAAAGATACAATGTTGGAAATCATGGAAAGCCCTTGAAAGGTTATGTAAATCTTGTGGAAGAACTTAGGATGCTTAATGAACAGAGGGTTGCGTTCTTGCACAAGTGGTTGTTGGGAATCGATCAACAGTATCCATTGTAG | 966 | 38.61 | MAETEGRHARKMSMKGSIEVGKEKWAKHYSSNHQILLVGEGDFSFALSLATSFGSASNIVATSLDSYDIVIKKYKRAKTNLKILDNFGAQLLHGVDSTRMKLHHDLRMRKFDRIVYNFPHAGFVGKESDRLVIMMHRSLVRGFLRNASGMLRVNGEVHVSHKTVCPFYCWNIEELANQSCLKLLECVDFKIKDYPGYNNKRGDGKKPDQSFPLGKCKTFKFILSSKAMKSTRSRMMKSTECFRIFREYFNHECLVCEQGDNYIPYSFTNMLKIGFERYNVGNHGKPLKGYVNLVEELRMLNEQRVAFLHKWLLGIDQQYPL | 321 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g02275 | 321 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 46 | 166 | IPR029063 | - | |
| Tamo4g02275 | 321 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 23 | 213 | - | GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER) | |
| Tamo4g02275 | 321 | FunFam | Os09g0479300 protein | 33 | 184 | - | - | |
| Tamo4g02275 | 321 | Pfam | rRNA (uridine-N3-)-methyltransferase BTM5-like | 36 | 201 | IPR019446 | GO:0070042(InterPro)|GO:0070475(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g02275 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr4:38280267 | Tamo4g02279 | Tamo-Chr4:38353738 | dispersed | |
| Tamo | Tamo-Chr4:38280267 | Tamo4g02277 | Tamo-Chr4:38298099 | proximal |