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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo4g02296	ATGAGCAGCGATCTGAAGTCCAAATTCCTGGAAGTTTATGAGACTCTGAAATCAGAGCTCATTCATGATCCTGCATTTGAGTTCGACGACGATTCTCGTCAGTGGGTCGAACGGATGCTTGACTACAATGTACCTGGAGGAAAGCTAAACAGAGGCCTTTCTGTTGTGGACAGTTACAAGCTTCTTAAAGGAGAAGAAGAACTAACAGAAGATGAAGTTTTTCTTGCATGTGCTCTTGGTTGGTGCATTGAATGGCTTCAAGCATATTTTCTAGTACTTGATGACATCATGGATGAATCCCATACACGCAGAGGTCAACCATGTTGGTTCAGATTACCCAAAGTTGGTATGATTGCTGTAAACGATGGAGTTGTTCTTCGCAACCATATTCCTAGAATCCTAAAAAAACATTTCAGATCAAAATCCTATTATGTGGACCTACTCGATCTCTTCAATGAGGTGGAATTCCAAACCGCATCTGGACAGATGATCGATTTAATCACTACACTTGTTGGAGAAAAAGATCTGTCAAAATATTCTTTATCTATTCATCGCCGGATTGTTCAGTACAAAACTGCATATTACTCATTTTATATTCCCGTTGCATGTGCACTCCTTATGTTTGGAGAGAATTTGGATGATCATGTTCAAGTGAAAGATGTTCTTGTTGAAATGGGTACCTATTTCCAAGTACAGATTGGAACAGACATAGAAGACTTCAAATGTTCCTGGTTAGTTGTAAAAGCATTGGAACTTGTGAATGAGGAACAAAAGAAACTTCTGAATGAGAACTACGGGAGAAAGGATCCAGGCAGCGTGGAAAAAGTGAAGGAACTATACCATACTCTTAACCTTCAGGTGTCTTTCTTTTTCTTTACCACAATTATATATAAAATATAA	900	38.67	MSSDLKSKFLEVYETLKSELIHDPAFEFDDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKLLKGEEELTEDEVFLACALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAVNDGVVLRNHIPRILKKHFRSKSYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYIPVACALLMFGENLDDHVQVKDVLVEMGTYFQVQIGTDIEDFKCSWLVVKALELVNEEQKKLLNENYGRKDPGSVEKVKELYHTLNLQVSFFFFTTIIYKI	299

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo4g02296	299	Gene3D	Farnesyl Diphosphate Synthase	1	298	IPR008949	-
	Tamo4g02296	299	PANTHER	FARNESYL-PYROPHOSPHATE SYNTHETASE	4	290	IPR039702	GO:0004161(PANTHER)\|GO:0004337(PANTHER)\|GO:0005737(PANTHER)\|GO:0008299(InterPro)\|GO:0016765(InterPro)\|GO:0045337(PANTHER)
	Tamo4g02296	299	SUPERFAMILY	Terpenoid synthases	23	285	IPR008949	-
	Tamo4g02296	299	Pfam	Polyprenyl synthetase	34	282	IPR000092	GO:0004659(InterPro)\|GO:0008299(InterPro)
	Tamo4g02296	299	CDD	Trans-IPPS-HT	31	251	IPR000092	GO:0004659(InterPro)\|GO:0008299(InterPro)
	Tamo4g02296	299	ProSitePatterns	Polyprenyl synthases signature 1.	91	105	IPR033749	-
	Tamo4g02296	299	FunFam	Farnesyl pyrophosphate synthase	1	299	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo4g02296	K00787	farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Tamo	Tamo-Chr4:38574434	Tamo7g04408	Tamo-Chr7:87755374	dispersed

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tamo3g00977	.	241	285	FARNESYL DIPHOSPHATE SYNTHASE (FPS) gene family	AT5G47770	58.696	1.37e-11	60.5
	Tamo4g02296	.	42	354	FARNESYL DIPHOSPHATE SYNTHASE (FPS) gene family	AT5G47770	71.565	5.81e-166	464.0
	Tamo7g04408	.	37	384	FARNESYL DIPHOSPHATE SYNTHASE (FPS) gene family	AT5G47770	77.011	0.0	564.0