AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02420 ATGGCGGATTTCGAAGCACCTTCTTTCTCTTTAGGGCTGGATTGTGACTCCGAGCCCGAGCCCCAAATCAGTTTTGTAAGTGAAGAAGATGATTATGGAAGTCTAATTGTCGATGATTCGGAGCCTGAATTTTATTCGGATCCTCATCCGAAGCTGAAGCGCCTCCGGCGTATACTCACGACAGATGTCACATCTACAACAACATCTTCATCAACCATTTCGGAGAAGTCTAAGGCGGAGTTAAATACTAGTCCGGTTATCGGTGATGAAGACGACGATGTGTTCTGTTTGCAAGAGGATGGGCTTACAGACGAACATCTGCATACACAAAACTGTGCTTTGACCAACCAATCAGGAAAGAAAAGTCAAACCATCGGTCAACGCAGACGGTTTCTGTTGACTTTATCTGACTCTGATTCCGATGTTCCTTCTGTTAGCAACACTGCTAATAATCCAAAAAGTAATGAATTGAATTCATTTGATTCAGTCGACTTATCCACTACAGACAGTAGTCAATGGAACCAATTCAGACCCGAAAAAAGTTTATTAAATTTGGATGATGAATCTCTTCCTCCCTCTATTTGTTACTTTTTTCATAATGATCAAAGGATCCAAGAGCTTGTTCAAACCCGCCTACCTAATTTTTCACCTTTGTGGAAAATGTCAAATAGAGATCTTGAACAGCCAAGTACTTCAGAAATCGATTACATGGGCCAATTTAGCTCAAAAGAAGTTGGTAGAAATACTAAAGATAATAAAACCTCAAGTAAAAGAAAATTTTCAAGAAAAGAGAAAATTGAAGAGATATCACAAGGTTGGGTGAACCCAAAGGTTTGTGTTGATAATGGGATAAGAAAAGGTGATTCAAAAAGAAAGGTTCATGGAGTCCTGAAAAGTGCAGGGTATTGGTTAACCGGTACAGATGGAAAAAGGGTTTATGTTGGTAAAAAGGGTCAAGAGTTGACCGGGCGAGTTGCTTACATGCAGTATAAAAAGGAAACCGGATCGGGGTTTAAAAAAACAAGGAGAAAATTTGCTACTAAGAAGAAAAAATAA 1056 39.3 MADFEAPSFSLGLDCDSEPEPQISFVSEEDDYGSLIVDDSEPEFYSDPHPKLKRLRRILTTDVTSTTTSSSTISEKSKAELNTSPVIGDEDDDVFCLQEDGLTDEHLHTQNCALTNQSGKKSQTIGQRRRFLLTLSDSDSDVPSVSNTANNPKSNELNSFDSVDLSTTDSSQWNQFRPEKSLLNLDDESLPPSICYFFHNDQRIQELVQTRLPNFSPLWKMSNRDLEQPSTSEIDYMGQFSSKEVGRNTKDNKTSSKRKFSRKEKIEEISQGWVNPKVCVDNGIRKGDSKRKVHGVLKSAGYWLTGTDGKRVYVGKKGQELTGRVAYMQYKKETGSGFKKTRRKFATKKKK 351
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02420 351 MobiDBLite consensus disorder prediction 136 171 - -
Tamo4g02420 351 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 118 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02420 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5396032 Tamo Tamo2g01203 Tamo-Chr2:23733757 Tamo4g02420 Tamo-Chr4:43273090
5401107 Tamo Tamo4g02420 Tamo-Chr4:43273090 Tamo4g02434 Tamo-Chr4:43536243