AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02422 ATGATGAACCCGGTCAACCAAGAAGCAAGACCCGAAGCATCACTAATCATTCCCGAGAAACGAAAACGAGGCCGACCACGAAAAGACCCAAGCGAAAGACGGGCAGCAAAAGCCGCCCGTGCACAAGCTGCCCGAATGAACCCCGGTCTCACCCACCACCACCACGCCACCCCCACCGCCACCCGTCCCGACCCAATCCACGACCCGACCCAAGTCATGATCGGTCAAACCATAACCGGTGTAGTCGAGGCCACCTTCGATGCCGGTTACCTTCTCGCAGTCAGAATCGGTAACTCAAACATAACCCTAAGAGGCGCGGTGTTCAAGCCAGGTCACACCGCTCCAGTCACACCCGAGAATGACGTGGCGCCACATGTCGAAATGATCAAAAGAGCCCAAGTCCCATTCCCCGAAACCCAACCGGTAGTCCGCAGGCGGAAAAGAAGATCAAAAGAGAAAAACATGCAGCTGGTGACTTACGTCCCTAACGGGTCCCACGACCAGGTACAACCACAACAAAATTACGTTTTTACCCCTTCTGTTTCGGCTAGAGGGAATGTTATCCCGGTTGTTCTACCAAACGGGCCGACAACATCGCCATCGATGACTCAACCGCCACCTCATATGCGGGCCACACAAGGGAAACCGGTCCACTCGGTTTTGCCTTTGGCGGTTTACCCGCCGAATGGGTCAACGAGTCAAGCTTCTGAGTCACAGACGAGTTCACAATTTACACCTACAGGGTCCGGGAATGAGAATGTTTCAGTCAAACAAGGCGGGGTGGATGGTCAACAGGCGGAAGGTGGTGGTGGTAGTAAGTCAACTGTTGTGAAGACGGAAACGGATATTGGGGATATGAATGAGCCACTTTTTGTTGAACCGTTGCAGACTCGACACACGGTTCACCATTTTCAGAATGCGGGGCCCGCGATGGGTCCCGGGATGCATACGGGAACTGGGAGAATGACAGAACTTCTACAGGCTGTTCAACAGAATATGGGAGACGACCAGGTCCCACGAAACGGCCCTCAAACTGCTGATTTTATGGAAACGGATGGAGGAAAGCTGTAA 1071 53.5 MMNPVNQEARPEASLIIPEKRKRGRPRKDPSERRAAKAARAQAARMNPGLTHHHHATPTATRPDPIHDPTQVMIGQTITGVVEATFDAGYLLAVRIGNSNITLRGAVFKPGHTAPVTPENDVAPHVEMIKRAQVPFPETQPVVRRRKRRSKEKNMQLVTYVPNGSHDQVQPQQNYVFTPSVSARGNVIPVVLPNGPTTSPSMTQPPPHMRATQGKPVHSVLPLAVYPPNGSTSQASESQTSSQFTPTGSGNENVSVKQGGVDGQQAEGGGGSKSTVVKTETDIGDMNEPLFVEPLQTRHTVHHFQNAGPAMGPGMHTGTGRMTELLQAVQQNMGDDQVPRNGPQTADFMETDGGKL 356
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02422 356 MobiDBLite consensus disorder prediction 1 66 - -
Tamo4g02422 356 MobiDBLite consensus disorder prediction 194 275 - -
Tamo4g02422 356 MobiDBLite consensus disorder prediction 14 39 - -
Tamo4g02422 356 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 2 345 IPR045881 -
Tamo4g02422 356 MobiDBLite consensus disorder prediction 334 356 - -
Tamo4g02422 356 MobiDBLite consensus disorder prediction 226 260 - -
Tamo4g02422 356 MobiDBLite consensus disorder prediction 194 208 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02422 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5365571 Tamo Tamo4g02422 Tamo-Chr4:43287715 Tamo8g03569 Tamo-Chr8:75757469
5401109 Tamo Tamo4g02422 Tamo-Chr4:43287715 Tamo4g02432 Tamo-Chr4:43523213