AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02535 ATGGAGTCGATAATTGCAAGGGCGCTGGAGTATACTCTCAAGTACTGGCTCAAATCCTTCACCAGAGATCAGTTCAAGTTACAAGGACGAACTGTTCAGCTCTCGAATTTAGATATAAACGGTGATGCGTTACATGCGAGCCTTGGATTGCCTCCAGCTTTGAATGTTACAACCGCGAAAGTCGGGAAGTTAGAAATTATACTTCCTTATTTGAGCAATGTACAAGTTGAACCTATTGTTGTGCAAATCGATAAACTCGATTTGGTATTGGAAGAAAATGATGATTTGGATGCATATAAGAGCACAGACAGTGCACAAACGCCATCTACTCCTGCAAAAGGTAGTGGATATGGATTTGCAGACAAGATTGCAGATGGAATGACATTAGAAGTAGGGACCGTCAATCTTTTACTTGAGACTCATGGAGGTGCTAGACGTCGTGGAGGGGCAACTTGGGCATCACCAATGGCATCTATAACTATCCGCAACCTCTTGCTTTATACCACAAATGAAAACTGGCAGGCTGTAAACCTTAAGGAAGCCAGGGACTTTTCAAATGACAAGAAGTTCATCTACGTGTTCAAAAAACTTGAATGGGAGCATCTATCAATCGACCTTCTACCTCACCCTGACATGTTTGCAGCATTTTCTGAAGGTGCATTTAAAGATGATGATGGTGCAAAGCGAGTTTTTTTTGGTGGTGAGCGGTTTCTTGAAGGAATTTCAGGAGAAGCTTATATTACCATACAAAGAACAGAGCTTAATAGTCCATTAGGGTTAGAACTTCAACTACATATCCCTGAAGCAGTGTGTCCAGCTTTGAGTGAACCAGGATTACGAGCTCTTCTTCGATTTTTTACGGGATTGTATGTGTGTTTAAATAGAGGAGACATGAATCCAAATGCTCAAGAGCGATCAGCTGAAGCTGCAGGGCGTACACTAGTCTCCATTATGGTGGACCATATATTCTTTTGCATCAAAGATACTGACTTCAAGTTAGATCTTTTGATGCAGTCACTTCTCTTTTCTCGGGCAAGCCTTTCTGATGGAGAAATCACCAAATGTTTAACTCGGGTCATGATAGGTGGACTCTTACTGCGGGACACTTCCTCTCGCCCACCATGCGCGTTAGTACAACCATCGATGCAGGATGCCTCAGAGGAACCACTACACATTCCAGATTTCGGAAAGAATTTCTGTCCTCCAATATATCCATTAGGCGATCACCAATGGAAATTAAGCGACCGGGTCCCACTCATCTCCCTCCATTGTCTTCAATACATGCCCTCACCTACCCCGCCATCATTCTCTACACAAACCGTCATTGACTGCCAGCCTCTCATGATACATCTACAAGAGGAATCCTGTCTAAGAATCTCATCCCTACTAGCAGATGGACTCATGGTCAACTCCAATCACATCTCACCCTATTCCTCCATCAACTCCCTTGAATTAAACATCAAAGGAATCGACATCACAATCCCACTCCAAAGTAATTCACTCAATAACTCCTTTACTGGAGCAAAACTCCATATTAAAGATCTTTTCTTCCACGAATCACCTTCCTTGCGCCTCAAGCTACTCCACCTGGAAAAAGACCCCGCGTGTTTCTCCTTCTGGAAAGGCCAGCCAATCGACTCCAGCCAAAAGAAATCGACAGCTGGCGCCTCCCTCATCAACCTCTCGTTACTTTCCCATTCCACCACCGGAATCGGTGATTCCGATTCCGGTTTCGGATTCCAGTGTGTGGAAGTGAAGGACGCGTGTGTGCAGGTCGCGATGGTGACGGCAGACGGGTCCCCGATGTCCGACGTCCCACCGCCAGGTGGCGTCGTGAGAGTGGGCGTCGCGTGTGAAGAGTATAAGTCAAACACGTCCGTTGACCAGCTGTTTTTCGTCCTGGATCTGTACGCGTATTTTGGTACAGTCAGCGAGAAGTTAGCCTCCGTTGCAAAAAACAAAAATAAAAATGAAAATGAAAAGGTGGTGAGTTTAATTGATAAAGTTCCGGGAGATACGGCGGTTAGTTTGGCGGTTAGGAATCTCAAACTAACGTTTCTAGAATCTTCCATAGGTGAAATAATCCCTTTAGTGGAGTTTTTCGGAGATGATTTATTTATGGAAGTTACACATAGGACCCTCGGTGGCGCAATGGCAATTTCGTCGAATTTACGGTGGGAAAAAGTCCAGGTGGACTGCGCTGAAACCGAAAAAAAATTATTAATTCCAAATGGTAACCAAAATGGATTTTCTCTCAATAAATTAAGACCCGTTTTTTGGGTGCAAAAAGGAAAGAAAAGTCAACCGTTTTTATACCTAAAAATGGTACATGTGATTCCGTATAATTCAAGAGATAACGAATGTCATAGTGTGAGTCTATCCGCTTGTGTTGCTGGTGTACGGTTAGCCGGTGGGATGAGCTACACCGAATCGCTACTCCACCGGTTCGGAATCCTAGGACCCGATGGTGGGCCCTCGGACGGGCTTTCGAGAGGTTTGGACCGGTTATCCAATGGCCCGTTTTCGAAGCTTTTTAAACCGTCGGGTCATGAGGAGAAGGATGGTGGTGGGGGCGGTGGGTATTTGCAGGTTGGTGCGCCTGATGACGTGGACGTGGTGCTGGAGTTGAAGGATTGGTTGTTTGCGTTGGAGGGTGCTGACGTGGCGGAACGATTGGGTTTGGATAGGGAGGAGAGGTCGTGGCATACGAGTTTCGAGAGTTTTAAAGTTAAGGCGAAAAGTTGCATGGTGAATGGGAAAAAGAGGTCTAAGCATCCTGTTGAATCAGTGACGGTTGGTGTTGAAGGGTTACAAACACTAAAACCACAACAACATAAAAAAGAATTACAAACAAACGGGCACAAAGAAACCATAGAGTCACATCATGGAGGGGTCAATCTTGAATCCCACATAGTCTTATCCGAAGACAACAACAATGATGATGGTATTAATGGAGTAATCAAGTGGATAGTTGAAAGCCTAAAATTCTCCGTCAAACATCCCGTCGAGGCAATTGTAACCAAACACGAGCTACAACATGTTGCCAAACTATGCAAGTCGGAAGTCGACTCCATGGGGAGAATCACAGCTGGCGTTTTACGTGTCTTCAAGTTAGAAAATTCTATCGGTCAGACTGCAATGGATCAGTTAACTAATCTCGGGAGTGAAGGGTTTGATAAAATCTTCTCACAAAAAGATAATAGTAGTTCTTCAGATGACTTTAATTCAACATTGACTTCACTTGAAGCCACATTGTTGGATACACAAACAAATTGTGTAGCTCTTGTTGATAACTTAGGCAGTTCTGAATCTATGAAGACACACGTTCAGAGTGTACAACAACTTAACCAGAAACTAGAGAGTATGCACAAGTTATTGGCTAAGTTGCAGACCAAGGAATAA 3402 44.21 MESIIARALEYTLKYWLKSFTRDQFKLQGRTVQLSNLDINGDALHASLGLPPALNVTTAKVGKLEIILPYLSNVQVEPIVVQIDKLDLVLEENDDLDAYKSTDSAQTPSTPAKGSGYGFADKIADGMTLEVGTVNLLLETHGGARRRGGATWASPMASITIRNLLLYTTNENWQAVNLKEARDFSNDKKFIYVFKKLEWEHLSIDLLPHPDMFAAFSEGAFKDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLELQLHIPEAVCPALSEPGLRALLRFFTGLYVCLNRGDMNPNAQERSAEAAGRTLVSIMVDHIFFCIKDTDFKLDLLMQSLLFSRASLSDGEITKCLTRVMIGGLLLRDTSSRPPCALVQPSMQDASEEPLHIPDFGKNFCPPIYPLGDHQWKLSDRVPLISLHCLQYMPSPTPPSFSTQTVIDCQPLMIHLQEESCLRISSLLADGLMVNSNHISPYSSINSLELNIKGIDITIPLQSNSLNNSFTGAKLHIKDLFFHESPSLRLKLLHLEKDPACFSFWKGQPIDSSQKKSTAGASLINLSLLSHSTTGIGDSDSGFGFQCVEVKDACVQVAMVTADGSPMSDVPPPGGVVRVGVACEEYKSNTSVDQLFFVLDLYAYFGTVSEKLASVAKNKNKNENEKVVSLIDKVPGDTAVSLAVRNLKLTFLESSIGEIIPLVEFFGDDLFMEVTHRTLGGAMAISSNLRWEKVQVDCAETEKKLLIPNGNQNGFSLNKLRPVFWVQKGKKSQPFLYLKMVHVIPYNSRDNECHSVSLSACVAGVRLAGGMSYTESLLHRFGILGPDGGPSDGLSRGLDRLSNGPFSKLFKPSGHEEKDGGGGGGYLQVGAPDDVDVVLELKDWLFALEGADVAERLGLDREERSWHTSFESFKVKAKSCMVNGKKRSKHPVESVTVGVEGLQTLKPQQHKKELQTNGHKETIESHHGGVNLESHIVLSEDNNNDDGINGVIKWIVESLKFSVKHPVEAIVTKHELQHVAKLCKSEVDSMGRITAGVLRVFKLENSIGQTAMDQLTNLGSEGFDKIFSQKDNSSSSDDFNSTLTSLEATLLDTQTNCVALVDNLGSSESMKTHVQSVQQLNQKLESMHKLLAKLQTKE 1133
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02535 1133 PANTHER UNCHARACTERIZED 1 738 IPR026728 -
Tamo4g02535 1133 Pfam VPS13-like, N-terminal 1 102 IPR026854 -
Tamo4g02535 1133 Coils Coil 1112 1132 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02535 - -