Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g02617 | ATGGGGTTGTCTCTCAAAGTCGCTGTCGTTTCCGCCACCGTATTATCAACCGCCGTTATGCTCAAGCTTCTTGCACCGGTTATTATGGAGTTGGCAATCTCCGACCTTCCGTCCATATGGACCTCCGTCGTATCCTGGCTTAAACCGCCGTATCTTTACGTCGTCATCAACTGTATCATCATCACCATCGTTGCTTCTTCGCGGTTACAGTCCTCCAAGCTCGATGATTCCATTTCTCCGGCGATGTCAGCTGTTCTACTCCCAACTGATCCCATAAAGGTCGAGGTCGGCGTCGTCCTCCCTGTTGAGCTACCTCCGGTTCGTGAACCGGAACCACCGTTCCACGGTGGCGAGTTTGCGAATGAGCCAGTGAAGATCGCCGCCGTTAGTTACATCAATAGTCCGATGTTTGTTCAAGCTCCGGAACCGGACTTTGGTGCTACTACTCGGTTTACTGATGAATATAGGGATGAAGAGATGAAGGTAGCCACGGAAGCTTACGAAGAAATCACAAAAAACAGAGTTAATAAGAATGTAATCTCGATGTCCTCATGGAACCCGTCAAAAATCGATCGAGTAGATGTCACTTTTCCGGTGGAAAAACCACCAGCTTCCGCCAGATTCAACCACCGGAAACCTGCAAAAGCCACTGCCGAAGGTGGACGGACGTTGGGAGTTGCGAAACCAAAGCGTCAGGACACGCTGGAAACCACGTGGAAGACAATAACAGAAGGCCGGTCGGTGCCGTTAACGAGACACCTCCGTAAATCCGACACGTGGGAAACGTCAGACAGTCACGGCCGCAACTCCGATGACTCACAGTCACCGATCGACGATCATAATCACTCCGAAAGGATGACGAAATCGGATACGTTTGACGTGAAACGCGGCGGAGGGAGCAGTAGGAAACCGCCTACTCCGGCGTCGAAGCTGAGCCGGTCAGGTGGGTCGGGGAGGCTGAGGAAGGATCCGTCGTTGGGACAGGAGGAGCTTAACCGGAAAGTGGAAGCATTTATTAAGAAATTCAACGAGGATATGAGATTACAGAGACAAGAATCGTTGAATCAGTACATGGAGATGATCAATCGTGGGGCTCATTGA | 1101 | 51.04 | MGLSLKVAVVSATVLSTAVMLKLLAPVIMELAISDLPSIWTSVVSWLKPPYLYVVINCIIITIVASSRLQSSKLDDSISPAMSAVLLPTDPIKVEVGVVLPVELPPVREPEPPFHGGEFANEPVKIAAVSYINSPMFVQAPEPDFGATTRFTDEYRDEEMKVATEAYEEITKNRVNKNVISMSSWNPSKIDRVDVTFPVEKPPASARFNHRKPAKATAEGGRTLGVAKPKRQDTLETTWKTITEGRSVPLTRHLRKSDTWETSDSHGRNSDDSQSPIDDHNHSERMTKSDTFDVKRGGGSSRKPPTPASKLSRSGGSGRLRKDPSLGQEELNRKVEAFIKKFNEDMRLQRQESLNQYMEMINRGAH | 366 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g02617 | 366 | MobiDBLite | consensus disorder prediction | 203 | 331 | - | - | |
| Tamo4g02617 | 366 | Pfam | Cotton fibre expressed protein | 328 | 363 | IPR008480 | - | |
| Tamo4g02617 | 366 | PANTHER | COTTON FIBER (DUF761) | 23 | 364 | - | - | |
| Tamo4g02617 | 366 | Pfam | Domain of unknown function (DUF4408) | 37 | 69 | IPR025520 | - | |
| Tamo4g02617 | 366 | MobiDBLite | consensus disorder prediction | 249 | 297 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g02617 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr4:48847189 | Tamo8g03485 | Tamo-Chr8:73811370 | dispersed | |
| Tamo | Tamo-Chr3:91161477 | Tamo4g02617 | Tamo-Chr4:48847189 | wgd | |
| Tamo | Tamo-Chr4:48847189 | Tamo7g00583 | Tamo-Chr7:7757683 | wgd |