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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02622 ATGGCGGCAATCTTATCCTCCGCCATATCCGCCTCCAATTTCAGAGCGATTACAAACTCAAGGAGAACATCAGCTCCATTAAAATCCAGGTCTCGAATCTCCATGGTTAATCGCCACCAACATTCTGCTCCTTTGTTTGTTCCAGAGGTTGAAAGTGCAGTTGATACCTTGTACCCGGAGTTCAGGGCGGTGGATAATCTTGTGGCTCATAACACCTCTAGAGTTCTCAAAGCTTTTCAGAACGCAAGGGTCGGATCTCATCACTTCAGCGGTTGCACTGGCTATGGTCATGAAGAAGCAGGAGGACGAGAAGCCCTAGACCAAGCTTTTGCAGAAATTTTTGGTGCTGAATCAGCAATTGTCCGATCGCATTTCTTCTCAGGCACTCATGCTATCACATGTGCCCTGTTTGCTTTCTTAAGACCAGGCGATGAGCTTTTGGCAGTTGCTGGTGCTCCTTATGATACACTAGAGGAAGTTATAGGTATCAGAGATGGAAATGGATTAGGTTCATTGAAAGATTTTGGAATCAAATATCGAGAAGTAGCACTTGCAGATGATGGAGGTCTTGATTGGGATGCTCTTGAAGTGGCTATAAAACCTCAAACAAAATGTGCCCTAATTCAAAGATCATGTGGGTATACTTGGCGAAAAAGTTTAAGTGTGGATGAAATATCAAGAGCAATACACATGATCAAGGCACAAAATCCTAACTGTTTAGTTATGGTGGATAACTGCTATGGTGAATTCACAGAGACCATTGAACCTCCAATGGTGGAAGTTTAA 786 43.38 MAAILSSAISASNFRAITNSRRTSAPLKSRSRISMVNRHQHSAPLFVPEVESAVDTLYPEFRAVDNLVAHNTSRVLKAFQNARVGSHHFSGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSHFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDGNGLGSLKDFGIKYREVALADDGGLDWDALEVAIKPQTKCALIQRSCGYTWRKSLSVDEISRAIHMIKAQNPNCLVMVDNCYGEFTETIEPPMVEV 261
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02622 261 Gene3D - 46 97 - -
Tamo4g02622 261 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 16 259 IPR009651 -
Tamo4g02622 261 Gene3D - 98 261 IPR015421 -
Tamo4g02622 261 Pfam Methionine gamma-lyase 51 259 IPR009651 -
Tamo4g02622 261 SUPERFAMILY PLP-dependent transferases 58 251 IPR015424 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02622 - -