Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g02683 | ATGAGTTGCATGATCCCCAAGTCGACTTCTGCTGGATCTTCTCGCCCGGAATTTGTGATGTCGACCAAAGCATGGGTTTTGCACGGCGTCGCCGTCGCGGCTGCTCTCGTCGGCGCTCACGCATACTTCTATTACCGCCGATCTGCCACCATTTTTCGGAGTCGAGTTGTCGGCATAATTCCAGCTCGGTTCGCTTCTTCCCGATTTCAGGGCAAACCCCTCGCTGAGATCCTCGGCAAACCCATGATCCAGAGAACTTGGGAAAGAGCAAAGTTGGCAACGACATTGGATCGCGTTGTTGTGGCAACGGATGATGAAAAAATTGCAGAATGCTGTCGTGGATTCGGTGCTGATGTGATAATGACCGCCGAGTCTTGCAGAAACGGCGCCGAGAGGTGTAGTGAAGCACTTCAAAAACTCGACAAAAAGTACGACATTGTTGTCAATATTCAAGGAGATGAACCGCTAATTGACCCTGAAATAATCGATGGAATTGTTAAAGCCCTTCAGACGACCCCAGATGCAGTTTTCAGCACTGCGGTCACATCCTTGAAACCAGAAGATGCTTTTGATCCAAATCGTGTGAAATGTGTTGCTGATAATCGTGGTTATGCAATTTACTTTTCTCGAGGACTCATTCCTTTTAACAAGTTTGTAAACTGTTGA | 666 | 47.75 | MSCMIPKSTSAGSSRPEFVMSTKAWVLHGVAVAAALVGAHAYFYYRRSATIFRSRVVGIIPARFASSRFQGKPLAEILGKPMIQRTWERAKLATTLDRVVVATDDEKIAECCRGFGADVIMTAESCRNGAERCSEALQKLDKKYDIVVNIQGDEPLIDPEIIDGIVKALQTTPDAVFSTAVTSLKPEDAFDPNRVKCVADNRGYAIYFSRGLIPFNKFVNC | 221 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g02683 | 221 | NCBIfam | 3-deoxy-manno-octulosonate cytidylyltransferase | 58 | 217 | IPR004528 | GO:0008690(InterPro) | |
| Tamo4g02683 | 221 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 46 | 220 | IPR029044 | - | |
| Tamo4g02683 | 221 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 56 | 215 | IPR029044 | - | |
| Tamo4g02683 | 221 | PANTHER | 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE | 13 | 217 | - | GO:0005829(PANTHER)|GO:0008690(PANTHER) | |
| Tamo4g02683 | 221 | CDD | CMP-KDO-Synthetase | 55 | 217 | IPR004528 | GO:0008690(InterPro) | |
| Tamo4g02683 | 221 | Pfam | Cytidylyltransferase | 57 | 217 | IPR003329 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g02683 | K00979 | 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr4:50345975 | Tamo7g00635 | Tamo-Chr7:8422275 | dispersed |