Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo4g02689	ATGGGCAATACAGGTGATGATGTAGATACCTCTTCACCTATGAAGATAGAAAAGAAAAAGAAGAAAAACAACAACAGAACCAATGATGGTGATGGTGATGGTGATGGTAACACTCATCTAAATGAGAAACTTCATGAACATACAAAAAAGAAGAAGAAGACATCAGAATCAAATGAAGATGTAGAAGAAAATGGTGATATTAAACAAAAGAAGAGGAAAAGAGAAAAAGAAAATGATGATGATCCAAAAGTGAAAAAAGACAAGAAGAAAAAGAGGGAACTAGAATCAAATGAAGATGTAGATTTACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGATTCTTCTGAAAAAACACAAACAAAAGAAAATGAGCATAGCCAAGAAGACGATCCGAAATTGGAAAAACACAAAAAGAAAAAGAAAAAATTAAAATCAAACGAAGGTGGAGGAGATGACAGTAATAACTTGGAAGACAATGGTGATTTAAAGAAGAATGCGAAGAAGAAGAAGAAAGATTCTTCCGAAAATTCACAAAAAAAGAAAACCAAAAAAGTGACCTTTTCAAGTGATGTAGAAATCTTCCCTCCATCAAAAACCAAGAAAAAAGAAAAACCAAAAACCGACGACAACCTCGTACGCGGGAAAAGATTCACGCCAGAAGAAGACGAAATCGTCAAACAAGCCGTCGAAGCCTACATAGTCTCCAACAACCTCGGAGACGACGGCTTGAAAATGATCCTAAACTGCAAATCCCACAAAGGCATGTCAAAATGCTGGCAAGAAATCGCCACATGCATCCCCTACCGCCCCTACACTGCCGTCTACTACCGGGCCCACATCCTCTTCGAGCAGTCCGAACACCGTCAATGGTCCCCAGAAGAAATCAACTTCCTCAAAGAATCCTACAAAAAACACGGAAACAAATGGAAAATGATCGCTGAAGAACTCGGGAAACACCGGTTCCACGTCAAGGACACGTGGCGAAGAATCAAACTCGACAATCTAAAAACCGGGAAATGGACTCAAGACGAGTACCAAAACCTCTACGACATGGTCAACCTGGATCTTCAGATGAAGATCACAGGCGAGGGCCAGGAGAAACACTCCAAGCACGGGATGTTGCGTGACAACATCCCGTGGACTTCCATCAGCGAGAAGCTGTCGACTAGAAGCGACGCGACTTGCTGTATCAAGTGGTACGACCAGTTGACGTCGAGTTTAGTCGCAGAGAAAAAGTGGGCGGACGCGGATGATTATTGGTTGATTGGGAGGCTATATGAGATTGATGCGGCGTGTGTGGAGGATGTGGAGTGGGATGATCTTTTGGAGCATAGGAGTGGGGAGATTTGTAGGAAGAGGTGGGATCAGATGGTGGTGCGGATTGGGGAACATAGGAGTAAGACGTTTGGTGAACAAGTTGAGATTTTGGCCAAGAGGTATAGGCCGGAGTTGGCTGAAGCTAGACAGACGTGGGATGATAAACCGGTTGTTCCATGA	1506	42.56	MGNTGDDVDTSSPMKIEKKKKKNNNRTNDGDGDGDGNTHLNEKLHEHTKKKKKTSESNEDVEENGDIKQKKRKREKENDDDPKVKKDKKKKRELESNEDVDLQKKKKKKKKKKKKDSSEKTQTKENEHSQEDDPKLEKHKKKKKKLKSNEGGGDDSNNLEDNGDLKKNAKKKKKDSSENSQKKKTKKVTFSSDVEIFPPSKTKKKEKPKTDDNLVRGKRFTPEEDEIVKQAVEAYIVSNNLGDDGLKMILNCKSHKGMSKCWQEIATCIPYRPYTAVYYRAHILFEQSEHRQWSPEEINFLKESYKKHGNKWKMIAEELGKHRFHVKDTWRRIKLDNLKTGKWTQDEYQNLYDMVNLDLQMKITGEGQEKHSKHGMLRDNIPWTSISEKLSTRSDATCCIKWYDQLTSSLVAEKKWADADDYWLIGRLYEIDAACVEDVEWDDLLEHRSGEICRKRWDQMVVRIGEHRSKTFGEQVEILAKRYRPELAEARQTWDDKPVVP	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo4g02689	501	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	290	338	IPR017930	-
	Tamo4g02689	501	Gene3D	-	294	332	-	-
	Tamo4g02689	501	MobiDBLite	consensus disorder prediction	11	104	-	-
	Tamo4g02689	501	MobiDBLite	consensus disorder prediction	159	190	-	-
	Tamo4g02689	501	Gene3D	-	333	411	-	-
	Tamo4g02689	501	MobiDBLite	consensus disorder prediction	1	193	-	-
	Tamo4g02689	501	CDD	SANT	293	321	IPR001005	-
	Tamo4g02689	501	SUPERFAMILY	Homeodomain-like	291	349	IPR009057	-
	Tamo4g02689	501	Pfam	Myb-like DNA-binding domain	293	351	-	-
	Tamo4g02689	501	Gene3D	-	215	291	-	-
	Tamo4g02689	501	SMART	sant	339	408	IPR001005	-
	Tamo4g02689	501	SMART	sant	216	287	IPR001005	-
	Tamo4g02689	501	SMART	sant	289	336	IPR001005	-
	Tamo4g02689	501	ProSiteProfiles	Myb-like domain profile.	408	461	IPR001005	-
	Tamo4g02689	501	Coils	Coil	44	64	-	-
	Tamo4g02689	501	MobiDBLite	consensus disorder prediction	118	138	-	-
	Tamo4g02689	501	ProSiteProfiles	Myb-like domain profile.	335	406	IPR001005	-
	Tamo4g02689	501	PANTHER	GB\|AAC33480.1	17	500	-	-
	Tamo4g02689	501	ProSiteProfiles	Myb-like domain profile.	293	334	IPR001005	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo4g02689	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Tamo	Tamo-Chr1:82097655	Tamo4g02689	Tamo-Chr4:50526831	dispersed
	Tamo	Tamo-Chr4:50397550	Tamo4g02689	Tamo-Chr4:50526831	dispersed
	Tamo	Tamo-Chr4:50502147	Tamo4g02689	Tamo-Chr4:50526831	proximal

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Tamo	Myb_DNA-bind_6	1.6e-09	CL0123		TF	MYB-related