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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02697 ATGGCTAACAACATTAGGGTTTTCATGATCATGTTGGCAATCCGCTTTGCAACATCGAAACCCATGATCTTGTCGTCTCAACCGCAACACGAATGGACGGTATTGAGTCGATTGTCAGGAGGAGGAGGATCTTCACGACGACTTGTAGGGGACACAATTGATTTAAGGGAAGAAATGATGATGGAATCAGAAAGTGCTCGAAGAATCTTGGCAGGAAGAGGTTATATAAGTTATAATGCAATGCAGAAGAACAACGTTCCATGCAATCAACGTGGTCAGTCTTATTATGATTGTAACAGTAGAGGTCGGGCTAATCCTTATTCTCGAGCACGTGACGTTGCTTCCATCCACAAAATCGATTATCTAGGGAAGATTTCTTAA 381 42.26 MANNIRVFMIMLAIRFATSKPMILSSQPQHEWTVLSRLSGGGGSSRRLVGDTIDLREEMMMESESARRILAGRGYISYNAMQKNNVPCNQRGQSYYDCNSRGRANPYSRARDVASIHKIDYLGKIS 126
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02697 126 Pfam Rapid ALkalinization Factor (RALF) 57 110 IPR008801 -
Tamo4g02697 126 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 8 110 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02697 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:50652109 Tamo5g01104 Tamo-Chr5:15229463 dispersed