Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g02740 | ATGAAAAGTAAGCCACCCGCTTTCGTCTTTACCTTTAAACCCTTCTTCCTTCTTCCCCAAATCCACAACCACCATTTTCATGTAAGACAACCATGGATTCCTCTTCTTTTACATCTGCTAGACCACCCTTTTCCCTCCTCTTTTCTCTCATGGCGAACTACCTACCTTCCTCTCTATAAATACCCTCATCTCCCACTCACTCACTCACTTACTCACTCTCTCGCTCCTCCTTTTAGCTTTCTGCAAATGGCTACTAACTCAGTTGAGATCGAGAACTCAGAAGAATCGAAAGTTCATGTTTTCTCATCATCAACAGAGTTACTCGAGAAGTTGCATCAGAAATGGAATTCCGTCGAGAAGCCTCCATATCCCGCCATGTATTCAAGTGTTTACGGCGGAATTATCCTCGATCCAGCGATGATGGTCATCCCAATCGACGATCATATGGTACATCGAGGTCACGGCGTATTCGACACCGCCATAATTCTCGACGGACACCTCTACGAACTAGACGCCCATCTCGATCGAATCCTCATTTCAGCATCAAAAGCCAAGATCTCATCACCATTCCCCAAATCAACCCTCCGCACCATTCTCATCCAACTAACCGCCGCATCAAACATCAAAAAAGGAACTGTCCGATACTGGTTAACTTCCGGCCCAGGTGATTTCCTTCTCACTCCTTCCAACTCCCAAGCCCCCGCATTCTACGCAGTCGTAATTGACGAAGAGTTCTCTCAATGCAAACACGGCGTTAAAGTAATCACCTCCACAATCCCCATGAAAGTCCCTCTATTTGCCACAAGCAAAAACGTAAACTACCTCCCAAACGTCCTCTCAAAACTCGAAGCAGAAGAGCAAGGGGCGTTTGCGTCGATTTGGGTAGATGATGAAGGGTATGTTGCAGAGGGTCCGAATGTGAATGTGGCGTTTGTGACACGTGGCAATGAGCTAATTTTGCCGTTTTTTGAAAAGATTTTGAGTGGCTGTACGGCTAAAAGACTTCTGGAATTGGCGCCGAAGTTAGTTGAAAATGGGAGGTTGAAAAGCGTGAAAACAGGGAATATTACGGTTGAAGATGCTAAAAATGCTGCTGAGATGATGTATGTTGGAAGCACGTTGCCTGTTTTGCCGATTATTGAGTGGGATGGAAAGCCTATTGGTGATGGGAAAGTTGGAGAATTGACGATGGCGTTATCGGATTTGGTTTGGGAGGATATGGTGGCGGGTCCTGAGACACATAGGTTGAAAGTTCCGTATGTGTAG | 1266 | 45.89 | MKSKPPAFVFTFKPFFLLPQIHNHHFHVRQPWIPLLLHLLDHPFPSSFLSWRTTYLPLYKYPHLPLTHSLTHSLAPPFSFLQMATNSVEIENSEESKVHVFSSSTELLEKLHQKWNSVEKPPYPAMYSSVYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILDGHLYELDAHLDRILISASKAKISSPFPKSTLRTILIQLTAASNIKKGTVRYWLTSGPGDFLLTPSNSQAPAFYAVVIDEEFSQCKHGVKVITSTIPMKVPLFATSKNVNYLPNVLSKLEAEEQGAFASIWVDDEGYVAEGPNVNVAFVTRGNELILPFFEKILSGCTAKRLLELAPKLVENGRLKSVKTGNITVEDAKNAAEMMYVGSTLPVLPIIEWDGKPIGDGKVGELTMALSDLVWEDMVAGPETHRLKVPYV | 421 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g02740 | 421 | CDD | ADCL-like | 147 | 403 | IPR017824 | GO:0008696(InterPro)|GO:0030170(InterPro)|GO:0046656(InterPro) | |
| Tamo4g02740 | 421 | Gene3D | - | 243 | 411 | IPR043132 | - | |
| Tamo4g02740 | 421 | SUPERFAMILY | D-aminoacid aminotransferase-like PLP-dependent enzymes | 131 | 408 | IPR036038 | GO:0003824(InterPro) | |
| Tamo4g02740 | 421 | Pfam | Amino-transferase class IV | 155 | 382 | IPR001544 | GO:0003824(InterPro) | |
| Tamo4g02740 | 421 | PANTHER | AMINO-ACID AMINOTRANSFERASE | 110 | 411 | IPR050571 | GO:0019752(PANTHER) | |
| Tamo4g02740 | 421 | FunFam | D-alanine aminotransferase | 243 | 410 | - | - | |
| Tamo4g02740 | 421 | FunFam | D-amino-acid transaminase, chloroplastic | 103 | 241 | - | - | |
| Tamo4g02740 | 421 | Gene3D | - | 100 | 242 | IPR043131 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g02740 | K18482 | 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr2:59267173 | Tamo4g02740 | Tamo-Chr4:51797389 | dispersed |