Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g02776 | ATGGCGACTTGCGTTCTCCTTCGCACCCTTCTCTCCTCCGCTAATCAATCCCTAATCCCTCGCTGCTTCACTACCTCTGCTTATATTCAACGTTTACGCCCTATTGCCGCCATCGCCGCCTCTAATATCCGCCAGTCCTCACTTGCAGCTACCAATGCCCGTACCTTCTCAACTCGCCAGACCACGTCCTCTCCGAATGATTTGAACCCTAATGATTCAGATTGTCCCCCGAAGGAGTCGATTCTTCTGGAAGGTTGTGATTTTAAGCACTGGCTTGTCGTGACGAAGAAACCCGAAGGCGAGCCGACGAGAGATGAGATAATCGAGTCGTATGTCGATACCCTAGCTCAGGCTGTTGGTAGCTACGATGAAGCAAAAATGAAGATCTATTCAGTCTCAACAAGATTCTACTATGCTTTTGGAGCCCTTGTGTCCGAAGAAGTTATTGACAAGCTCCACGAGTTACCTAATGGTCGTTTTGTGCTTCCTGATTCTTACTTGGATGTTGAGAACAAAGACTATGGAGGCGAGCCATTTATTAATGGGAAGGCAGTTCCATATGATCTAAAGTACCATGAAGAGTGGATTAAAAACAATGCTCCCAAAATGGGTTTCGATCTTACTTACTTTTTTACCGCCGAATGA | 645 | 46.36 | MATCVLLRTLLSSANQSLIPRCFTTSAYIQRLRPIAAIAASNIRQSSLAATNARTFSTRQTTSSPNDLNPNDSDCPPKESILLEGCDFKHWLVVTKKPEGEPTRDEIIESYVDTLAQAVGSYDEAKMKIYSVSTRFYYAFGALVSEEVIDKLHELPNGRFVLPDSYLDVENKDYGGEPFINGKAVPYDLKYHEEWIKNNAPKMGFDLTYFFTAE | 214 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g02776 | 214 | Pfam | Multiple organellar RNA editing factor 1, MORF domain | 88 | 179 | IPR054059 | - | |
| Tamo4g02776 | 214 | MobiDBLite | consensus disorder prediction | 54 | 73 | - | - | |
| Tamo4g02776 | 214 | PANTHER | MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED | 13 | 202 | IPR039206 | GO:0005739(PANTHER)|GO:0016554(InterPro)|GO:0080156(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g02776 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 166015 | Tamo1g04334 | Tamo4g02776 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr4:52359281 | Tamo4g02776 | Tamo-Chr4:52465025 | proximal | |
| Tamo | Tamo-Chr1:113094869 | Tamo4g02776 | Tamo-Chr4:52465025 | transposed | |
| Tamo | Tamo-Chr3:76119799 | Tamo4g02776 | Tamo-Chr4:52465025 | transposed | |
| Tamo | Tamo-Chr3:90668681 | Tamo4g02776 | Tamo-Chr4:52465025 | transposed | |
| Tamo | Tamo-Chr5:13470354 | Tamo4g02776 | Tamo-Chr4:52465025 | transposed | |
| Tamo | Tamo-Chr7:61839601 | Tamo4g02776 | Tamo-Chr4:52465025 | transposed | |
| Tamo | Tamo-Chr1:104323991 | Tamo4g02776 | Tamo-Chr4:52465025 | wgd |