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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02836 ATGGAAGATTTAAAGATCGATGAAGGAATACAAAAGGCTGGTGAAAAGTATAGATCGTTCCTCCATGAAGAAGCTAATAACACCCACTGGAGACATGGTGGTCCTCCTATCTATGATGCAGTTAACAAACTTTTTGAAGAAGGCCAAACCAAGGTATGGGGAAAGGGATCAATAGAAGAAACCGTTCAAAATGCAATTAAGTCATGGGAGATGGAGCTTAGCCATAAGACTAGGATACAAGATTTCAAGACCATCAATCCTGACAAGTTCAAACTAATTGTCAACGGGAGGGAGGGATTGTCTGCGGAGGAAACACTGAAGGTTGGGAGTTACAATGCATTACTGAAGAGTACACTTCCAGAAGAGTATAAGTACTACAAAGCAGAAGAAGAAACCTTCGAATCCTCTCACGACGTTTTCCGATCGGCATTCCTCGTGGATTTGCGTGGGAAGTGA 456 42.32 MEDLKIDEGIQKAGEKYRSFLHEEANNTHWRHGGPPIYDAVNKLFEEGQTKVWGKGSIEETVQNAIKSWEMELSHKTRIQDFKTINPDKFKLIVNGREGLSAEETLKVGSYNALLKSTLPEEYKYYKAEEETFESSHDVFRSAFLVDLRGK 151
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02836 151 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 5 144 IPR053218 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02836 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:53728506 Tamo8g00120 Tamo-Chr8:2291757 dispersed