Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g02841 | ATGGCCGATATCGAAACCCTAGGTATTCTAGATGAGATTCAAGCACTCGTCTCCGATAAGCTTCAAGTGGTTTCTTACAAGTGGTTGAGTCGGAACTTTTTGGTGCCATCAAATACTGCCAAGAGACTCCTTGATGATTTTGTGAAAAAGAACGAATCTCAACTGGAGGTTATATATTCTTTATCCGGATGGTTGAAGAATAATCCTTCAGCTTACCATATAAAGCTTGTTACGACCTCCAAACTTCCAGAAGCCAAAGAAGAATTTGGTGACGATTGTTCAGTTCAAGTTTACAGTGTTCAAGCATGTGTCCCTAAAGATCCATCAGTGATTTGGAATACTGAATTTATACAAACAGAAGAGCTCTTTAAAGAACCCCCTAATGTCATCAATTGCTTACGTGACAACAGGTTTTGTGGGGTTTCAAATTCATATGTGAAACGAAATACTGAAGGAACACCTGTAATCAAGACACCTTCATTCCAAGAAAAAAAAGCTGAACAGTCAAACCCTAAACCAGAAAAGGTCAAAGATGTTTCAAATGCAAGTCATAGAGCACAAGTTTCTGAACAAAAGGAGGTCAAACCAGTTCCACATAAAGAGAAACTTCCTCAAATTCCAAACAAAAAGAAACCTCAAAATGATAAAACCTCTTCAATTAATTCAGGTTCATTAGCCAGTATGTGGGGCCGTGCATCTTCAAAACCAAAACCCGACCCCATTCCTGTTTCTAATGCAGATGCACAGGTTATTGCTGATGAGATGATGGAAAATGTAAGCAGTGATGATGAAGATGAACAAATGAACTTCAAAAGAGGCTCTAATGGTGAAGGGAATAACAGAAAAAGGAGAGTTGTTTTTGACAACTCTGATGATGATGATGAAGAAAAAGATATGGTGGTGAGCTTATCTTCACCAGATCCTCCAAAAAAACAAGTTTCTGTTGATTTAAAGAAAAGTGGAAAAACAAATTCGGGTCTTGAAAATAAGAACTTGGATTTTAATGAAAAAAAAGAAGAGAAAGTGAAGGTTTCTGATGTTGATTCTAAAAGTATATTGAAAGAAGAAAGAAATGATAATCCTATTTTAAATGAGAATCAATGTCCTAAAAAAGATGACGTGGAAGTAGTACAGAAAGATAAAGGGAGTGATGCTACTAAAAATGGTGTTAAAAAGAGGAAAGTTTTGAAGACTAGAATCGATGAACGTGGACGAGAAGTAACCGAAGTCGTTTGGGAGGATGAAGAGAAAGAGACAAAGCCTGATGACAATACAAGAAAAGATAAAGCCGATAATAATACCACCAACAAGCCTCTTGCATCAGCTCCTAAAAAGTCACCAGCAGTCGGAAATCCAGCTGGCAAAACAGGAAACAAGAAAGCTGTTTCAAAGGATCCTAAACAGGGGAACATCATGTCTTTCTTCAAGAAGAAATAA | 1437 | 37.16 | MADIETLGILDEIQALVSDKLQVVSYKWLSRNFLVPSNTAKRLLDDFVKKNESQLEVIYSLSGWLKNNPSAYHIKLVTTSKLPEAKEEFGDDCSVQVYSVQACVPKDPSVIWNTEFIQTEELFKEPPNVINCLRDNRFCGVSNSYVKRNTEGTPVIKTPSFQEKKAEQSNPKPEKVKDVSNASHRAQVSEQKEVKPVPHKEKLPQIPNKKKPQNDKTSSINSGSLASMWGRASSKPKPDPIPVSNADAQVIADEMMENVSSDDEDEQMNFKRGSNGEGNNRKRRVVFDNSDDDDEEKDMVVSLSSPDPPKKQVSVDLKKSGKTNSGLENKNLDFNEKKEEKVKVSDVDSKSILKEERNDNPILNENQCPKKDDVEVVQKDKGSDATKNGVKKRKVLKTRIDERGREVTEVVWEDEEKETKPDDNTRKDKADNNTTNKPLASAPKKSPAVGNPAGKTGNKKAVSKDPKQGNIMSFFKKK | 478 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g02841 | 478 | MobiDBLite | consensus disorder prediction | 151 | 166 | - | - | |
| Tamo4g02841 | 478 | MobiDBLite | consensus disorder prediction | 331 | 433 | - | - | |
| Tamo4g02841 | 478 | Gene3D | DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 7 | 148 | IPR041913 | - | |
| Tamo4g02841 | 478 | MobiDBLite | consensus disorder prediction | 264 | 290 | - | - | |
| Tamo4g02841 | 478 | MobiDBLite | consensus disorder prediction | 167 | 181 | - | - | |
| Tamo4g02841 | 478 | MobiDBLite | consensus disorder prediction | 188 | 209 | - | - | |
| Tamo4g02841 | 478 | MobiDBLite | consensus disorder prediction | 151 | 478 | - | - | |
| Tamo4g02841 | 478 | PANTHER | DNA POLYMERASE DELTA SUBUNIT 3 | 1 | 478 | IPR019038 | GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(InterPro)|GO:0043625(PANTHER)|GO:1904161(PANTHER) | |
| Tamo4g02841 | 478 | FunFam | DNA polymerase delta subunit | 7 | 149 | - | - | |
| Tamo4g02841 | 478 | Pfam | DNA polymerase subunit Cdc27 | 23 | 478 | IPR019038 | GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro) | |
| Tamo4g02841 | 478 | MobiDBLite | consensus disorder prediction | 210 | 229 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g02841 | K03504 | DNA polymerase delta subunit 3 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr4:53890844 | Tamo8g02235 | Tamo-Chr8:31687118 | dispersed |