Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo4g02847	ATGTTATCGCCACTGCCGTTGCCGGAAATTGTCATCACAGCATCGCCTGACGGCCCGTTCACCGCCTACGATCCACACTCTGGAAGTGTGGTAGGTCGGTTTAATGGCAACCGGTGTCCTCGTAACGGCATCTGTGTTCTCGGAAAAGAGCTATTCGCCGCTTCACATGTTTCGCCGGAGACACGTGCAGGCTATGTTCGTATCTATTACTGGTGCTCAATGTCACGTGTGAAGAGTATTCCTCTCCCTGAACCTGTAGCTCCACTTGCTGGTTCCGTCGACGGATTGTATGTGTTTTCCGGTGGTATTTCCGGCCAGATCCATTCCGTATCGGTACATTCAGGAGACGTAATCCGGTCATTTCCAGTTCATGAGAAACCTGTATCTTGCGTTACGATCAATCGTGATGGATCGTTGATTCTCTCCGGAAGTGATGACGGAACTATTGCCGTTCTTCCGATATTACTGCTTCTAGATACTTCTGTAGATATGGAATCGAGATACTCGAGTTTTACCAGGTTCACCGGACACGAATCATCGGTGACAGGGTTAACCGCCGGCATGGGAAGACGCGGTGGAATTATGATCTCTAGCTCATTGGACTGTACGTGCAAAATGTGGAGCCTGAACGGGATCCATCTACAAACGGTGAGATTTCCCGTCGAGGTATGGTGCACGGCGTTGAATCCGCCGGAGACGGAATTGTTTGCTGCAGGAATTGATGGAATGGTATACAAAAGAAAGCTTATGGTCGAGAGGAGAAAGCAGTTTTTGGAAGGAGGAAAGACGGTGGTATGGGGCGGGGTGCACGACGGAGGATTGGTGGCGATGGAAATGTTGAGCGACGGGAGGATTCTTTTGACGGTTTCTGGAAATGGTGAGATTTTTGCATGGGACGTGGAGAGTGGTAAGATGATACGTGGGTTTGGTGAGAAGATTGGAGGTGTTAGTGGATTTGTGGTTGCAAAAGGTGGTGGTGTTTTCGCAAGGAGTGGGGTTGGAGGTGGTTATGGCAGTCGGAAGGAGGTGGGTAAGGCGGCGAAGGAGGTGGCGGCAATGAAGAAAGTTTTGAAAGTGGCGGTAGAAGATCGGAGAAGGGCGATTAGTAATCTTGAGTCAGCAATTGAGATTAACGAAAATATGCTAAAACTCATGCTCAGGGAGGCGAAGGCAATTGCCAAATCCAAGAATAACTAG	1197	49.37	MLSPLPLPEIVITASPDGPFTAYDPHSGSVVGRFNGNRCPRNGICVLGKELFAASHVSPETRAGYVRIYYWCSMSRVKSIPLPEPVAPLAGSVDGLYVFSGGISGQIHSVSVHSGDVIRSFPVHEKPVSCVTINRDGSLILSGSDDGTIAVLPILLLLDTSVDMESRYSSFTRFTGHESSVTGLTAGMGRRGGIMISSSLDCTCKMWSLNGIHLQTVRFPVEVWCTALNPPETELFAAGIDGMVYKRKLMVERRKQFLEGGKTVVWGGVHDGGLVAMEMLSDGRILLTVSGNGEIFAWDVESGKMIRGFGEKIGGVSGFVVAKGGGVFARSGVGGGYGSRKEVGKAAKEVAAMKKVLKVAVEDRRRAISNLESAIEINENMLKLMLREAKAIAKSKNN	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo4g02847	398	SUPERFAMILY	Quinoprotein alcohol dehydrogenase-like	9	304	IPR011047	-
	Tamo4g02847	398	Gene3D	-	5	161	IPR015943	GO:0005515(InterPro)
	Tamo4g02847	398	PANTHER	WD-REPEAT PROTEIN 18	8	323	IPR045227	GO:0005656(PANTHER)\|GO:0006261(PANTHER)\|GO:0006364(PANTHER)\|GO:0097344(PANTHER)
	Tamo4g02847	398	ProSitePatterns	Trp-Asp (WD) repeats signature.	286	300	IPR019775	-
	Tamo4g02847	398	SMART	WD40-4	260	299	IPR001680	GO:0005515(InterPro)
	Tamo4g02847	398	SMART	WD40-4	210	248	IPR001680	GO:0005515(InterPro)
	Tamo4g02847	398	SMART	WD40-4	114	153	IPR001680	GO:0005515(InterPro)
	Tamo4g02847	398	SMART	WD40-4	167	208	IPR001680	GO:0005515(InterPro)
	Tamo4g02847	398	ProSiteProfiles	Trp-Asp (WD) repeats profile.	121	151	IPR001680	GO:0005515(InterPro)
	Tamo4g02847	398	Gene3D	-	162	335	IPR015943	GO:0005515(InterPro)
	Tamo4g02847	398	ProSiteProfiles	Trp-Asp (WD) repeats profile.	270	308	IPR001680	GO:0005515(InterPro)
	Tamo4g02847	398	Pfam	WD domain, G-beta repeat	172	208	IPR001680	GO:0005515(InterPro)
	Tamo4g02847	398	Pfam	WD domain, G-beta repeat	116	150	IPR001680	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo4g02847	K14829	pre-rRNA-processing protein IPI3