Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g02899 | ATGACATTCCCTGAGTTCTTTGAAGAGGACGGGAAGGTAAACCCTGCTTTTGACGCTTATCGCGATTGTAACCATCGGCCTCCAGCAACTGTAGACCTCAACTACGATGGCAATGATATCTCGGTACTTTCTTGTGGTCAACAGATAAGCACCAATATGATTGTAATGTATAGGCAGATGGTTACCAACGCCGGCAACCCATTAAGCTTCTTTGGCGGCAAATATAGTGTTGGGGACGATGCCATAGCTAATGGTGACCCATCTGTTGGGTCAATAGAGGTTGGGTGTCATACGGCAGTGCACAGGTGGGTGGGTAACCCAAGAATGCCGAACAATGAGGACATGGGGAACTTCTACTCTGCGGGGTATGATCCTGTGTTTTACGTCCACCATACGAATGTAGACCGTATGTGGAAACTATGGAAGGAGATGGGTATCAAAGGACACATTGAACCTCCAGAGCCTGATTGGCTTAACGCATCGTACGTATTCTACAATGAAAACGAAGAGCTTGTACGTGTATACAACAAAGACTGTGTACGCTTGGAAAAACTAAAATACGACTATGAAGTCGTCCCAATCCCATGGAAATACAGCCGACCCATTGCACGTACAAAGAAATCAAACATCGCGTTGTTATCTGTTGAAACCGTGAAAGAAGCTCAAGATTCCAAGTTTCCATTGAAGTTAGACAAGATAAGGAAGGTTTTGGTGAAGAGGCCAATCATAAATCGAAGCCAAGAGGACAAGGAGAATGCAAATGAGGTGTTGTTGATTAAGGAAATCATCTTTGGAGATGAGAGTGAGTTCGCAGGTAGTTTCGGACAGTTGCTACATAACCATAACCCTAATGAAGATATGTTGATCAGGAGTGCTATAAGGTTCGGATTAACGGAGCTTTTGGAGGACATTGGCGCAACGAATGATGAGTTTATATTGGTGACATTGGCGCCAAAGGTTGGGTGCGAGGAGGTGACCATTGGCGAGATCAAGGTCGAGTTAGTTCCAATAACTGGCTGA | 1020 | 44.9 | MTFPEFFEEDGKVNPAFDAYRDCNHRPPATVDLNYDGNDISVLSCGQQISTNMIVMYRQMVTNAGNPLSFFGGKYSVGDDAIANGDPSVGSIEVGCHTAVHRWVGNPRMPNNEDMGNFYSAGYDPVFYVHHTNVDRMWKLWKEMGIKGHIEPPEPDWLNASYVFYNENEELVRVYNKDCVRLEKLKYDYEVVPIPWKYSRPIARTKKSNIALLSVETVKEAQDSKFPLKLDKIRKVLVKRPIINRSQEDKENANEVLLIKEIIFGDESEFAGSFGQLLHNHNPNEDMLIRSAIRFGLTELLEDIGATNDEFILVTLAPKVGCEEVTIGEIKVELVPITG | 339 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g02899 | 339 | PRINTS | Tyrosinase copper-binding domain signature | 96 | 107 | IPR002227 | GO:0016491(InterPro) | |
| Tamo4g02899 | 339 | PRINTS | Tyrosinase copper-binding domain signature | 123 | 141 | IPR002227 | GO:0016491(InterPro) | |
| Tamo4g02899 | 339 | PANTHER | TYROSINASE FAMILY MEMBER | 3 | 302 | IPR050316 | - | |
| Tamo4g02899 | 339 | Pfam | Protein of unknown function (DUF-B2219) | 266 | 334 | IPR022740 | GO:0004097(InterPro) | |
| Tamo4g02899 | 339 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 124 | 135 | IPR002227 | GO:0016491(InterPro) | |
| Tamo4g02899 | 339 | Gene3D | - | 1 | 192 | IPR008922 | - | |
| Tamo4g02899 | 339 | Pfam | Polyphenol oxidase middle domain | 154 | 201 | IPR022739 | GO:0004097(InterPro) | |
| Tamo4g02899 | 339 | SUPERFAMILY | Di-copper centre-containing domain | 14 | 196 | IPR008922 | - | |
| Tamo4g02899 | 339 | Pfam | Common central domain of tyrosinase | 83 | 143 | IPR002227 | GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g02899 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr2:15839795 | Tamo4g02899 | Tamo-Chr4:55160551 | dispersed | |
| Tamo | Tamo-Chr4:54931406 | Tamo4g02899 | Tamo-Chr4:55160551 | dispersed | |
| Tamo | Tamo-Chr4:55160551 | Tamo5g01297 | Tamo-Chr5:17984071 | dispersed | |
| Tamo | Tamo-Chr4:57608159 | Tamo4g02899 | Tamo-Chr4:55160551 | transposed | |
| Tamo | Tamo-Chr1:106815811 | Tamo4g02899 | Tamo-Chr4:55160551 | wgd |