Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g02903 | ATGGCAATCATAGAAATGCGAGTGCATGTAGATTGTCCAGGATGCGAGAACAAGATCCGAAAAGCTCTTCAAAGACTCAAAGGTGTGGAGAACGTAGACATAGACATGGGGTTACAGAAAGTGACGGTGACTGGATACGCCGACGAGAAGAAGGTGTTGAAGACCGTCAGAAAAACTGGCCGCCGAGCTGAGATCTGGAACGTACCTTACAACCCTGATATCCGTAGCCATAACTACAACGTTAATCAATATGCTCAACAGCAACCACAAAACGGTGGTTCTACCGCCCCTGGCACAGCTGGCCCAGGCCCATCGGCGACGTTCTACACCCGGCAGCCATCATCGGCGTCCTCGTACAATTACTATAAACACGGTTATGATAACTACCAGGGTTTTAACCCGATCCAGTCATCGGGGTTGATTGGACACCAGACTGGTGCTGCCTTTAGCGATGAAAATACGAATGCTGCCTGTAATATCATGTAG | 486 | 48.97 | MAIIEMRVHVDCPGCENKIRKALQRLKGVENVDIDMGLQKVTVTGYADEKKVLKTVRKTGRRAEIWNVPYNPDIRSHNYNVNQYAQQQPQNGGSTAPGTAGPGPSATFYTRQPSSASSYNYYKHGYDNYQGFNPIQSSGLIGHQTGAAFSDENTNAACNIM | 161 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g02903 | 161 | SUPERFAMILY | HMA, heavy metal-associated domain | 3 | 67 | IPR036163 | GO:0046872(InterPro) | |
| Tamo4g02903 | 161 | CDD | HMA | 5 | 64 | IPR006121 | GO:0046872(InterPro) | |
| Tamo4g02903 | 161 | PANTHER | COPPER TRANSPORT PROTEIN ATOX1-RELATED | 3 | 161 | IPR045181 | GO:0046872(InterPro) | |
| Tamo4g02903 | 161 | Pfam | Heavy-metal-associated domain | 7 | 61 | IPR006121 | GO:0046872(InterPro) | |
| Tamo4g02903 | 161 | Gene3D | - | 2 | 65 | - | - | |
| Tamo4g02903 | 161 | MobiDBLite | consensus disorder prediction | 87 | 110 | - | - | |
| Tamo4g02903 | 161 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 64 | IPR006121 | GO:0046872(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g02903 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr3:93149723 | Tamo4g02903 | Tamo-Chr4:55307028 | dispersed | |
| Tamo | Tamo-Chr4:55307028 | Tamo6g00285 | Tamo-Chr6:3822516 | dispersed | |
| Tamo | Tamo-Chr4:55307028 | Tamo2g01940 | Tamo-Chr2:51497469 | transposed | |
| Tamo | Tamo-Chr4:55307028 | Tamo3g01084 | Tamo-Chr3:21511448 | transposed |