AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02937 ATGATTCCTCTTCCCGTTGTCACTACGCAATTTGATACACCGAAAGCTGCAACTTCGTGGTCAATAATGGCGGTCGACAAGAAAGAAAAGATGGCCGTTCAGGCTACAGAAAGCTCTGAAATGGGAAGATCTCGAGAAGATGAAGTTGCAGGAGATGACAACTCTGGTATCCGGACGGCGGAGACTCTACTGAGGCTGTTTCCGGTGGGGTTGTGTGTGGCGGCGCTGGTGGTTATGCTTAAGGATTCTGAAACTAATGAATATGGCTCTCTTTCCTACTCCAATATCACCGCTTTCAGGTTTTTAGTGCATGCTAATGGAATCTGTGCCGGTTATTCACTACTCTCGGCGGCTTTCACGGCGATTCCTCGCCCTATAACCATGTCGCGAGCTTGGACCTTCTTCCTCCTTGACCAGGTTTTGACGTACTTGATACTGGCGGCGGGTGCGGTGGCGACGGAGGTGGCGTTTCTATCATACAAAGGAGATTTGGCGGTGACGTGGAGTGAGGTGTGTGGAACTTACGGCCACTTCTGCAAAAGTGCGACGGCGTCAATTATCATCACTTTCACGGTGGTGATTTGCTACGTTTTGCTGTCGTTGATATCTTCTTACAGGCTATTCAGCAAGTATGATGCTCCTGTTGGCTACCATAACAAAGGGATCGAGATTGTTGACTTTGGGAATTGA 690 48.84 MIPLPVVTTQFDTPKAATSWSIMAVDKKEKMAVQATESSEMGRSREDEVAGDDNSGIRTAETLLRLFPVGLCVAALVVMLKDSETNEYGSLSYSNITAFRFLVHANGICAGYSLLSAAFTAIPRPITMSRAWTFFLLDQVLTYLILAAGAVATEVAFLSYKGDLAVTWSEVCGTYGHFCKSATASIIITFTVVICYVLLSLISSYRLFSKYDAPVGYHNKGIEIVDFGN 229
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02937 229 PANTHER CASP-LIKE PROTEIN 4A4 47 209 - -
Tamo4g02937 229 NCBIfam plant integral membrane protein TIGR01569 64 205 IPR006459 -
Tamo4g02937 229 Pfam Casparian strip membrane protein domain 55 195 IPR006702 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02937 - -