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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02962 ATGGCCAAGCAAAAGATCGTTGTGAAGGTGACAATGTGCTGTGAAAAGAAAACTCGTAAGGCTTTGAAGATCGCCGTTGGTATCTCCGGGGTGGAATCAGCTTCTTTTGTCGGCTCAGATAAAGACCAGATAGCAGTGACCGGAGAAGGAATTGACTCAGTGGAACTGGCGACGTTGCTACGGAAAGGTGTAGGATACACAGAGCTAGTGAGTGTTGGTCCGGTGGAGGAGAAGAAACCCGCCGCCACTGCTGAAACGAAGCCCACGGTGGTGCTGCCTTATGCTCATCCGTACCAGTACTACTACAACAACTATGGGTGGCCGTTTTATCTATAA 336 49.7 MAKQKIVVKVTMCCEKKTRKALKIAVGISGVESASFVGSDKDQIAVTGEGIDSVELATLLRKGVGYTELVSVGPVEEKKPAATAETKPTVVLPYAHPYQYYYNNYGWPFYL 111
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02962 111 PANTHER OS04G0464100 PROTEIN 4 86 IPR044296 -
Tamo4g02962 111 Gene3D - 1 78 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02962 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:56450759 Tamo4g02962 Tamo-Chr4:56548468 dispersed
Tamo Tamo-Chr4:56548468 Tamo4g02971 Tamo-Chr4:56693774 dispersed
Tamo Tamo-Chr4:56545701 Tamo4g02962 Tamo-Chr4:56548468 tandem
Tamo Tamo-Chr4:56548468 Tamo4g02963 Tamo-Chr4:56582440 tandem