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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02963 ATGGCGAAGCAAAAGATTGTAGTGAAGGTGACAATGAACAACGAAAAGAAAATTCGTAAAGCTTTGAAAATCGCCGTTAGCCTCTCCGGCGTGGAATCGGTGTCTTTCATTGGTTCAGATAAAAGTCAGATCGCTGTAACCGGGGAAGGTGTTGACTCAGTTGAATTGGCGATATTGTTGAGGAAAGGAGTAGGATACACAGAGCTGGTGAGTGTTGGTCCGGTGGAGGTGAAGAAACACGCCGCCGCCAATGAAATGAAGCTCACGGTGGCGCCACCACATGTTAGTCCTTATGAGTACTACTACGGCAACTATGGAATGCCCTACTATGCATATATATATGAGATTTGA 351 45.58 MAKQKIVVKVTMNNEKKIRKALKIAVSLSGVESVSFIGSDKSQIAVTGEGVDSVELAILLRKGVGYTELVSVGPVEVKKHAAANEMKLTVAPPHVSPYEYYYGNYGMPYYAYIYEI 116
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02963 116 Gene3D - 1 77 - -
Tamo4g02963 116 PANTHER OS04G0464100 PROTEIN 4 86 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02963 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:56582440 Tamo4g02972 Tamo-Chr4:56720666 dispersed
Tamo Tamo-Chr4:56548468 Tamo4g02963 Tamo-Chr4:56582440 tandem