Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo4g03008	ATGACGGAAGCTTCCAGGATCTTCCACACCACACTCATGCCTTCATTATCGCAAGCTTTATCTCCTAGAAAGCCTTGTTCTCTAACCATCACTCAACGAAAAACCTCACCAGTGATCATCCGCTGCACAATCTCCACCAGCAGCAGCAGCGATACAGCTAAGGCTTCCACCGCTCCTCAGCCGATACCATGGGGTTGCGAAATTGATTCTCTGGAGAACGCGGCCGCGTTGCAGAAATGGTTGACGGATTCCGGTTTGCCACCTCAGAAAATGGACTTACGGCAGGTTGATGTTGGAGAGAGAGGTCTCGTTGCCAATAACAACATCAGGAAGGGCGAGAAAATTCTATTTGTACCTCCCTCGCTCGTCATCTCCTCCAATTCGGAGTGGAGTTTTCCAGAAGCAGGGGAAGTTTTGAAGAGATACAATGTACCTGACTGGCCATTGATTGCAACTTACCTAATTAGCGAGGCAAGTCTCATGAAATCCTCTAGATGGAGCAACTATATATCAGCATTACCACGACAACCTTACTCACTATTATACTGGACACGAGCTGAATTAGATAGGTACTTGGAAGCATCACAGATTAGAGAACGAGCAATTGAAAGAATCAATAATGTTACTGGAACATATAATGACTTGAGAGATAGAATCTTCTCCAAGCATCCTAATTTGTTTCCTGAAGAGATATTCAACATGGAAACATTTAAATGGTCATTTGGCATTCTCTTTTCACGTTTGGTTCGATTACCTTCACTAGATGGAAGAGTAGCCTTAGTCCCATGGGCAGATATGTTAAATCATAGTTGTGATGTGGGAACTTTTTTGGATTATGATAAATCAACAAAAGGAGTTGTATTCACAACCGATCGTCCCTACCAGCCAGGTGAGCAGGTGTTTATATCATATGGGAGGAAATCAAATGGAGAACTTCTTCTCTCTTATGGGTTTGTCCCAAGACAGGGGACAAACCCGACTGACTCAGTCGAGCTTCCATTGTCACTTAAAAAATCAGATAAATGTTACCAAGAAAAAGTGGAAGCTTTAAAGAAAAACGGGTTGTCATCGACACAATGTTTTCCTTTACAAGTGACTGGTTGGCCATTAGAGCTAATGGCATATGCTTATTTAGCTGTGAGTCCTTCTAGTATGAGTGGAAAGTTTGAAGAGATGGCTGCAGCAGCATCGAATAAGACCAAAAGCAATAAGGAAATTAGGTATCCTGAATTAGAGGAACAAGCATTCCAATTTATCTTGGACAGCTGTGAATCCAGCATTTCAAAGTACACAAAATTCCTCCAGGCAAGTGGATCGATGGATTTGGATATAACATCTCCAAAGCAACTTAACCGAAAAGTCTTCCTTAAACAACTAGCAGTTGACTTGTGCAACAGTGAACAGAGAATTCTCTTTCGTGCTCAATATATATTGAGGAGACAATTGAGGGATATGAAGAAAGGTGAGCTCAAGGCCCTAAGATTGTTTGATAGTGTCACAAACTTCTTCAAGAAATGA	1518	41.96	MTEASRIFHTTLMPSLSQALSPRKPCSLTITQRKTSPVIIRCTISTSSSSDTAKASTAPQPIPWGCEIDSLENAAALQKWLTDSGLPPQKMDLRQVDVGERGLVANNNIRKGEKILFVPPSLVISSNSEWSFPEAGEVLKRYNVPDWPLIATYLISEASLMKSSRWSNYISALPRQPYSLLYWTRAELDRYLEASQIRERAIERINNVTGTYNDLRDRIFSKHPNLFPEEIFNMETFKWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVGTFLDYDKSTKGVVFTTDRPYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPTDSVELPLSLKKSDKCYQEKVEALKKNGLSSTQCFPLQVTGWPLELMAYAYLAVSPSSMSGKFEEMAAAASNKTKSNKEIRYPELEEQAFQFILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRAQYILRRQLRDMKKGELKALRLFDSVTNFFKK	505

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo4g03008	505	ProSiteProfiles	SET domain profile.	89	305	IPR001214	GO:0005515(InterPro)
	Tamo4g03008	505	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	335	503	IPR036464	-
	Tamo4g03008	505	CDD	SET-RBCMT	84	319	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Tamo4g03008	505	SUPERFAMILY	SET domain	73	321	IPR046341	-
	Tamo4g03008	505	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	74	481	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Tamo4g03008	505	Gene3D	-	323	490	IPR036464	-
	Tamo4g03008	505	PIRSF	RMT-SET	7	501	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Tamo4g03008	505	SMART	set-7	89	311	IPR001214	GO:0005515(InterPro)
	Tamo4g03008	505	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	57	318	-	-
	Tamo4g03008	505	Gene3D	set domain protein methyltransferase, domain 1	71	319	-	-
	Tamo4g03008	505	FunFam	Rubisco methyltransferase family protein	324	487	-	-
	Tamo4g03008	505	Pfam	Rubisco LSMT substrate-binding	338	471	IPR015353	-
	Tamo4g03008	505	Pfam	SET domain	101	305	IPR001214	GO:0005515(InterPro)
	Tamo4g03008	505	Coils	Coil	198	218	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo4g03008	-	-

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Tamo	SET	2.4e-16	No_clan		TR	SET