AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03010 ATGACATACGACGGCGTCAACGTATCCTACAATCTGGACTTCCGGTCGAAGAACGATGATGCGTGGTACACCTGCGGCGTCGTCCACGACGGAAAGCAACTCCGGGTGAAGTTCAAGGATTTCGCGGAGAGCTTCCATGACGAGGTTTTCTCCACCGCTGATTTCTCGTCTCACCGTGAAATCGAAGAATTCCTCCTTAGATTCCGTCAAACGTCGGAGCCGATAGAGGAACATGAGTGCTCTAGAGTTATAGAAGGCATGACAGTCTCTGCTACATATACAAGCGATGGATTAGTTCGATTCTTTGACGCAATTGTTGATGCTGTGTATTACAAAGAACATACGCCTGCGAAGTGCCTATGCACTTATTTACTATTCTGGCAACATGGTCCCGATGAGGGCAACATAACCGCAGCAAGTCTTGATGATTTATGTCTTATCATGTCTGGCGCCATTGATCCCAAAGTGGCCGAGTTTGCAAAGCTTGTGAGGGAAAAACTTAGAGGGTCCTTCTCTCAATCTAATCTGACATCCAAGACTCCATTTTTAACCAAAAAAAGGTCAAACCAAACACTCAACAAGTTACAGGAGTCGAGTGGTTATGGAGACGGTTTTCATGGTCGATTATCTGAAGGAAGGGGAAGATTCAAGATTCAAGTAATTGATCAAGACAAAGATATGGGAGGTGTCAAAGATACTGGATTTCATCATTACATAATATTAGAAAATCTGGAAAAAAATCTATCTCCGGTTTTAATGTCAGAGTTCATACATGAACAAACTTCAATCACAGCAGAAGCTCATGTTTTTCTAAGCTTTTCAGCAGAAACGTATGCAAGAGGGGCAATTGTGGTAAATAGCAGATCAAAGCTTAAAAGAATATATGAATTTATAAACAACCCAAATCACTTGATTATATCTTCATCTGGAAGGCCATGGGTAATAGCTGAAGACATGCTTAGAACTGGAACTTTGAACATAAACCTTCAAAGCTTGCATCCAAGATATGAGAATCGAAACACATGGAGCAAGTTGATGATTGTACGATTAGGAACAGAAGAATATACAAAAGCTAAAAATCTAAAAAATATATATATGGAATTTCGTGACCATTTAAATGGACTTGTGGAGAGATTAGATATGGAGGAGAAGAAGATCAGGCATCCATCAAGTGTGAATTAG 1182 40.61 MTYDGVNVSYNLDFRSKNDDAWYTCGVVHDGKQLRVKFKDFAESFHDEVFSTADFSSHREIEEFLLRFRQTSEPIEEHECSRVIEGMTVSATYTSDGLVRFFDAIVDAVYYKEHTPAKCLCTYLLFWQHGPDEGNITAASLDDLCLIMSGAIDPKVAEFAKLVREKLRGSFSQSNLTSKTPFLTKKRSNQTLNKLQESSGYGDGFHGRLSEGRGRFKIQVIDQDKDMGGVKDTGFHHYIILENLEKNLSPVLMSEFIHEQTSITAEAHVFLSFSAETYARGAIVVNSRSKLKRIYEFINNPNHLIISSSGRPWVIAEDMLRTGTLNINLQSLHPRYENRNTWSKLMIVRLGTEEYTKAKNLKNIYMEFRDHLNGLVERLDMEEKKIRHPSSVN 393
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03010 393 Gene3D - 75 146 - -
Tamo4g03010 393 PANTHER SAWADEE PROTEIN 8 386 - -
Tamo4g03010 393 Pfam SAWADEE domain 10 145 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03010 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:57556464 Tamo4g03014 Tamo-Chr4:57648892 proximal