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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03056 ATGGATGACAGTAACAACAGTTTTCAATCCAAGAAAATAGTTTTTGTGACAGTTGGCACAACATCTTTTGATTCTCTTATTAAAAGTGTGGACACTGAGCAAGTTAAACAAGAGTTATTTAAGAAAGGATACACTCACCTTGTTATTCAAATGGGTCGCGGATCCTACATTCCTAAAAAGTCTAGTGGTGAAGAAGATGGATCATCATTGGTTGTAGATTACTTCACTTTTTCCTCAAGTATTGCAGACTATTTGAAATCATCATCTCTTGTTATAAGCCATGCAGGTTCAGGGAGCATATTTGAGACATTAAGACTAGGGAAACCGTTAATTGTGGTAGTAAATGAAGAATTAATGGACAACCATCAAAGTGAGTTAGCAGAAGAATTAGCAGAAAGGAAACACTTGTTTTGTGGTTCCCCTCAATCACTTTACAAAGTAATTCAATCGATGGAATTGGAATCCATCATTCCGTACCTCCCAGGTGATGCCACTCCTGTTGCTAAACTTATCAATCGCTATCTCGGTTTTCCTTCTGATTAA 543 37.02 MDDSNNSFQSKKIVFVTVGTTSFDSLIKSVDTEQVKQELFKKGYTHLVIQMGRGSYIPKKSSGEEDGSSLVVDYFTFSSSIADYLKSSSLVISHAGSGSIFETLRLGKPLIVVVNEELMDNHQSELAEELAERKHLFCGSPQSLYKVIQSMELESIIPYLPGDATPVAKLINRYLGFPSD 180
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03056 180 Gene3D Glycogen Phosphorylase B; 8 175 - -
Tamo4g03056 180 SUPERFAMILY UDP-Glycosyltransferase-glycogen phosphorylase 45 135 - -
Tamo4g03056 180 PANTHER UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG13 9 179 IPR052474 GO:0006488(PANTHER)|GO:0043541(PANTHER)
Tamo4g03056 180 Pfam Glycosyltransferase family 28 C-terminal domain 13 155 IPR007235 GO:0016758(InterPro)
Tamo4g03056 180 FunFam UDP-N-acetylglucosamine transferase subunit alg13 8 175 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03056 K07432 beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]