AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03057 ATGGCCATACCAATAACCTCCGTCCTAATATTTTTTCATTTTCTCGCATCTCATTTCGATATCTCATACGCTCGAACGTGTTCAGAATACAAATTCACATCTCGAAGAATCTACACTTCATGTACAGACCTCCCTCATCTATCAGCACAACTACACTGGACCTACAACTCATCAACAGGCGTGGCCCGGATCGCGTACCGGGCCAGGCAGGGTCCACGCGGGTGGGTCGCGTGGGCCGTGAACCCAAACCAGATAGGCATGGTTGGGTCAGAAGCGATCGTAGGGTTTCATGATGGTAACGGGAGTGTGACAGTGTACACGACGTTGATAAATAGTTACAATCCGTTAATGGTGCCAGGGAATCTTAGCTTTCAGGTTTCGGGGTTGGGTGGTGAGTCATCGGTTAATGAGATTATTATTTTTGCTGATGTGGGCCCATTTGCGGGTGGGTCGGTTGTTAATCAAGTGTGGCAAGTTGGGAATTTGGTTTTGAATGGAGTCCCTCAAATGCATGCGGTTTCACAGCAAAATCTTCAGTCGACTGGGGAGATTGATTTCTTGTATAATGAGGAAAAACATAGGTAG 585 47.01 MAIPITSVLIFFHFLASHFDISYARTCSEYKFTSRRIYTSCTDLPHLSAQLHWTYNSSTGVARIAYRARQGPRGWVAWAVNPNQIGMVGSEAIVGFHDGNGSVTVYTTLINSYNPLMVPGNLSFQVSGLGGESSVNEIIIFADVGPFAGGSVVNQVWQVGNLVLNGVPQMHAVSQQNLQSTGEIDFLYNEEKHR 194
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03057 194 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 8 190 - -
Tamo4g03057 194 ProSiteProfiles DOMON domain profile. 47 160 IPR005018 -
Tamo4g03057 194 CDD DOMON-CIL1-like 38 187 IPR045265 -
Tamo4g03057 194 Pfam Protein of unknown function (DUF568) 87 186 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03057 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:58347942 Tamo1g05311 Tamo-Chr1:119908539 transposed