Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g03059 | ATGGGTAAGTTCTTGAGTCTTCTTTTTTGCATCTTGATATCGAATCTCGCCGGATTAAATGCTCAATCTTGCGAAACTGCCGCCTTTCGAAACAACGCTATCTACCGCACCTGCGTCTCTTTACCGGTTCTGAACTCGCATCTTCACTGGAACTACAACACCAACGGCACCGTCGACTTGGCTTTCCGGCACACCGGATCAGCCACATCTCAATGGGTTGCGTGGGCCCTCAACGTCCGCGGGTCTGGTATGGACGGAGCTCAGGCGCTTGTTGCGTTAACGCACTCTAACGGCTCGGTTGAAGCTTACACTACTTCAGTCAATGGTTTCCAAACGACTTTACAGCCGAGCCGGTTGAGCTTTGACGTGCCGACGATAACGGCGGAGAGGGTTAACGGCGTTGTGGTGATTTACGCGACGATAGTGTTGCCTAGTGGAGGGACGGGATTTAATCAGGTCTGGCAAGTGGGCCCTGTTGCTGATGGAGTTCCCAGAATTCATGCAATGACTGCCGATAATCGGGGTTCTGTCGGAAGAGTTGATTTTATCTCCGGTCAGACTTCCGCCGGCGGTGGTGCTGGTGGCTCGAGGCAGCGCAAGAGAAACACTCATGGAGTACTAAACGCTGTTAGTTGGGGATTATTGATGCCCATGGGAGCTATGGCAGCAAGATATCTTAAGGTGTTCAAAGTAGCAAATCCGGCCTGGTTTTACATCCACGCCGCTTGCCAAACTTCAGCCTACATCGTCGGCGTCGCTGGATGGGCCACCGGACTCAAACTCGGCGGCGACTCCGTCGGAATCAGATACGACGCTCACCGAAACATCGGGATCATTCTCTTTTCACTTGGAACACTTCAGGTTTTCGCCCTGCTTTTGAGACCTAAACCCGATAACAAATACAGAATCTACTGGAACGTGTACCATCACGGAATTGGATACGCCGTCATCTCTCTGAGCATTATTAATGTGTACAAAGGGCTTGATATCTTGGACCCTGAGAAGAAATGGAAGCACGCGTACACCGGAATACTCATCGGATTGGGGGTGGTCGCCGTCTTGTTGGAAGCTTTGACATGGTTTATTGTATTGAAGAGGAAGAAGGAAGACAAGAGGACACATGCCGGAGCTAATGGATATGGCCAGCCGGTGTAA | 1155 | 51.08 | MGKFLSLLFCILISNLAGLNAQSCETAAFRNNAIYRTCVSLPVLNSHLHWNYNTNGTVDLAFRHTGSATSQWVAWALNVRGSGMDGAQALVALTHSNGSVEAYTTSVNGFQTTLQPSRLSFDVPTITAERVNGVVVIYATIVLPSGGTGFNQVWQVGPVADGVPRIHAMTADNRGSVGRVDFISGQTSAGGGAGGSRQRKRNTHGVLNAVSWGLLMPMGAMAARYLKVFKVANPAWFYIHAACQTSAYIVGVAGWATGLKLGGDSVGIRYDAHRNIGIILFSLGTLQVFALLLRPKPDNKYRIYWNVYHHGIGYAVISLSIINVYKGLDILDPEKKWKHAYTGILIGLGVVAVLLEALTWFIVLKRKKEDKRTHAGANGYGQPV | 384 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g03059 | 384 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 6 | 368 | - | - | |
| Tamo4g03059 | 384 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 182 | 372 | - | - | |
| Tamo4g03059 | 384 | ProSiteProfiles | DOMON domain profile. | 44 | 157 | IPR005018 | - | |
| Tamo4g03059 | 384 | Pfam | Eukaryotic cytochrome b561 | 204 | 328 | IPR006593 | - | |
| Tamo4g03059 | 384 | CDD | DOMON-CIL1-like | 35 | 184 | IPR045265 | - | |
| Tamo4g03059 | 384 | SMART | 561-7 | 203 | 328 | IPR006593 | - | |
| Tamo4g03059 | 384 | Pfam | Protein of unknown function (DUF568) | 84 | 182 | IPR045265 | - | |
| Tamo4g03059 | 384 | Gene3D | - | 184 | 374 | - | - | |
| Tamo4g03059 | 384 | CDD | Cyt-b561-FRRS1-like | 180 | 357 | - | - | |
| Tamo4g03059 | 384 | PIRSF | UCP037471 | 1 | 382 | IPR017214 | - | |
| Tamo4g03059 | 384 | ProSiteProfiles | Cytochrome b561 domain profile. | 163 | 364 | IPR006593 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g03059 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 166047 | Tamo1g04425 | Tamo4g03059 | |
| 166048 | Tamo1g04427 | Tamo4g03059 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr1:106362912 | Tamo4g03059 | Tamo-Chr4:58376918 | dispersed | |
| Tamo | Tamo-Chr1:106375081 | Tamo4g03059 | Tamo-Chr4:58376918 | dispersed | |
| Tamo | Tamo-Chr4:4918813 | Tamo4g03059 | Tamo-Chr4:58376918 | dispersed | |
| Tamo | Tamo-Chr4:58376918 | Tamo8g03607 | Tamo-Chr8:76364158 | dispersed | |
| Tamo | Tamo-Chr4:58376918 | Tamo8g03620 | Tamo-Chr8:76553507 | transposed |