Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g03102 | ATGGGCATGGAAACCGGTACAAAGTTAGGTTTGCATAATCAAGAAGGATCTTTGAATCTTTATGTCATGGAATGTAATTGTCACATGCGCGATATCTCCATAGACCTAAATGGAGGTGCATCTTGGCTCTATCAAGGGATTGTGGATGCTTTCGAAGAACCAATAATTTCGGCAGTCACAAAAGAAATTATCAAGAAACTAAAAGCGGGAGTTATAAAGCTTGGATCCGTTATGAAATCTCTTCCAAAATTAGTTGAAGTGGATGATATTGCTACGTTAAATGTTACATTTGTTGATGACCCTTTTTTGAGTGACACTTCATTAGGGTTTGGGATAAATGGGTTATTTGTAGAACCTAAAAACGACAAATATTTATTCGCGAACAAGTTGCAACCACCCGTTTCTTGTTCGGATCCTAAAAAAATGCTTGGAATTGCATTAGATGAAGCCGTTTTCAACTCCGCATTTTCCTTATACTACAATGCCGTATTTATGCGATGGATAGTGGATAAAGCACCCGAACAAAATCTTTTAAACACGGCGGGATGGAGATTTATAGTCCCTCAACTTTATAGAAAATTCCCGAATGATGACATGAACTTGGAAATCTCTCTATCTTCTCCTCCAATTATACGGGTATCATCAAAACAGGACATTGATGCAATTATTTATGCAGACTTGATCATAGATGTTCTTCAAGGAGATGACACAATTCCTGTTGCTTGCATTTCATTGGTAATGACGGGTGTGGGTTCGGTTCAAATTACCGGAAATAACCTTACGGGTCATTTGAAATTGGATGATTTCACCATGTCGTTAAAATGGAGCAAAATTGGCACCTTGCACATGTTCCTAATTCAGCCAGTGATGTGGACGATTATTGAAACTGTTTTTCTGCCGTACATAAATGCACGTGTTGGGACAGGGTTCCCTTTGCCTATATTCCGTGGGATTAATCTTCAAAATGCTGAGATACTATTTCAAGATTCAAGAATCACAATCTGTAGTGATTTCAGTTATAAAGAACCGTTTGATCCTAGCCGTACACTTGTTTACTCTTCGAATATCATTAAGGGGTGA | 1080 | 38.15 | MGMETGTKLGLHNQEGSLNLYVMECNCHMRDISIDLNGGASWLYQGIVDAFEEPIISAVTKEIIKKLKAGVIKLGSVMKSLPKLVEVDDIATLNVTFVDDPFLSDTSLGFGINGLFVEPKNDKYLFANKLQPPVSCSDPKKMLGIALDEAVFNSAFSLYYNAVFMRWIVDKAPEQNLLNTAGWRFIVPQLYRKFPNDDMNLEISLSSPPIIRVSSKQDIDAIIYADLIIDVLQGDDTIPVACISLVMTGVGSVQITGNNLTGHLKLDDFTMSLKWSKIGTLHMFLIQPVMWTIIETVFLPYINARVGTGFPLPIFRGINLQNAEILFQDSRITICSDFSYKEPFDPSRTLVYSSNIIKG | 359 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g03102 | 359 | Pfam | LBP - BPI - CETP family, C-terminal domain | 137 | 340 | IPR001124 | GO:0008289(InterPro) | |
| Tamo4g03102 | 359 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 108 | 340 | IPR017943 | GO:0008289(InterPro) | |
| Tamo4g03102 | 359 | PANTHER | OS06G0309200 PROTEIN | 2 | 348 | IPR045897 | - | |
| Tamo4g03102 | 359 | Pfam | LBP - BPI - CETP family, N-terminal domain | 6 | 69 | IPR017942 | GO:0008289(InterPro) | |
| Tamo4g03102 | 359 | Gene3D | - | 1 | 70 | - | - | |
| Tamo4g03102 | 359 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 4 | 104 | IPR017943 | GO:0008289(InterPro) | |
| Tamo4g03102 | 359 | Gene3D | - | 71 | 344 | - | - | |
| Tamo4g03102 | 359 | SMART | bpi2-2 | 137 | 336 | IPR001124 | GO:0008289(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g03102 | - | - |