AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03102 ATGGGCATGGAAACCGGTACAAAGTTAGGTTTGCATAATCAAGAAGGATCTTTGAATCTTTATGTCATGGAATGTAATTGTCACATGCGCGATATCTCCATAGACCTAAATGGAGGTGCATCTTGGCTCTATCAAGGGATTGTGGATGCTTTCGAAGAACCAATAATTTCGGCAGTCACAAAAGAAATTATCAAGAAACTAAAAGCGGGAGTTATAAAGCTTGGATCCGTTATGAAATCTCTTCCAAAATTAGTTGAAGTGGATGATATTGCTACGTTAAATGTTACATTTGTTGATGACCCTTTTTTGAGTGACACTTCATTAGGGTTTGGGATAAATGGGTTATTTGTAGAACCTAAAAACGACAAATATTTATTCGCGAACAAGTTGCAACCACCCGTTTCTTGTTCGGATCCTAAAAAAATGCTTGGAATTGCATTAGATGAAGCCGTTTTCAACTCCGCATTTTCCTTATACTACAATGCCGTATTTATGCGATGGATAGTGGATAAAGCACCCGAACAAAATCTTTTAAACACGGCGGGATGGAGATTTATAGTCCCTCAACTTTATAGAAAATTCCCGAATGATGACATGAACTTGGAAATCTCTCTATCTTCTCCTCCAATTATACGGGTATCATCAAAACAGGACATTGATGCAATTATTTATGCAGACTTGATCATAGATGTTCTTCAAGGAGATGACACAATTCCTGTTGCTTGCATTTCATTGGTAATGACGGGTGTGGGTTCGGTTCAAATTACCGGAAATAACCTTACGGGTCATTTGAAATTGGATGATTTCACCATGTCGTTAAAATGGAGCAAAATTGGCACCTTGCACATGTTCCTAATTCAGCCAGTGATGTGGACGATTATTGAAACTGTTTTTCTGCCGTACATAAATGCACGTGTTGGGACAGGGTTCCCTTTGCCTATATTCCGTGGGATTAATCTTCAAAATGCTGAGATACTATTTCAAGATTCAAGAATCACAATCTGTAGTGATTTCAGTTATAAAGAACCGTTTGATCCTAGCCGTACACTTGTTTACTCTTCGAATATCATTAAGGGGTGA 1080 38.15 MGMETGTKLGLHNQEGSLNLYVMECNCHMRDISIDLNGGASWLYQGIVDAFEEPIISAVTKEIIKKLKAGVIKLGSVMKSLPKLVEVDDIATLNVTFVDDPFLSDTSLGFGINGLFVEPKNDKYLFANKLQPPVSCSDPKKMLGIALDEAVFNSAFSLYYNAVFMRWIVDKAPEQNLLNTAGWRFIVPQLYRKFPNDDMNLEISLSSPPIIRVSSKQDIDAIIYADLIIDVLQGDDTIPVACISLVMTGVGSVQITGNNLTGHLKLDDFTMSLKWSKIGTLHMFLIQPVMWTIIETVFLPYINARVGTGFPLPIFRGINLQNAEILFQDSRITICSDFSYKEPFDPSRTLVYSSNIIKG 359
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03102 359 Pfam LBP - BPI - CETP family, C-terminal domain 137 340 IPR001124 GO:0008289(InterPro)
Tamo4g03102 359 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 108 340 IPR017943 GO:0008289(InterPro)
Tamo4g03102 359 PANTHER OS06G0309200 PROTEIN 2 348 IPR045897 -
Tamo4g03102 359 Pfam LBP - BPI - CETP family, N-terminal domain 6 69 IPR017942 GO:0008289(InterPro)
Tamo4g03102 359 Gene3D - 1 70 - -
Tamo4g03102 359 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 4 104 IPR017943 GO:0008289(InterPro)
Tamo4g03102 359 Gene3D - 71 344 - -
Tamo4g03102 359 SMART bpi2-2 137 336 IPR001124 GO:0008289(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03102 - -