AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03106 ATGGAATTTGACAGCATATCTCAATCAGTAAAATGCATAACTTCATGGTTTCCAGGAACATTACACGAACAATCTCTTCTAAAAGACCATCTCAACTCCATGATAGGAGACGAGTTCCACGATGCTCCCAAAGAATTCCCAAACTACCCCTCAAAATCCGAACAAAACCCCTCAAATGAGTCAAACTCCACCCCTCTTGATAAAAATCAAGAAACTTCAAAAGATCAAACAACCGAAGAAGAAGAAGAAGAACTACAAACCCCACCACCTTACAAAAGAAGAAAGCTAACAAACTCCGCGGGAATCGACATCGAGGTCAACTTCTACACAGACATATCCCAAATTACCAAAATGCCCTCGCTAACCGACTGCGAAGAAACCGCGGACCCCACAGAGTCACGCGACGTATTACTTTTATTCCGGTTCAACAACCCTCAACTCCCATTTGAATTAAAAAAAATAATAGTATCCGATTTACGGTTACTGACACTTCTGGAAGCTGGTCTTCCATCATGGGTGATATTCTTCCAATCGTACCCAGTCTTTTGCCACATGTACCGGCCATGGATGTGCCCGTTAGCAAGGGCGTTATACGTAATTATCTCGATGGTAACCGTCGTTATCGGATTCTACGACCTTTACAAAAACGTACCGGTTTTGAAAGCGACGGCTTCGCGGCTGTGGGGCCCCTTATTGATTGGATCGAGACGTGGGAGATGGTGTCGAGGATAA 732 44.13 MEFDSISQSVKCITSWFPGTLHEQSLLKDHLNSMIGDEFHDAPKEFPNYPSKSEQNPSNESNSTPLDKNQETSKDQTTEEEEEELQTPPPYKRRKLTNSAGIDIEVNFYTDISQITKMPSLTDCEETADPTESRDVLLLFRFNNPQLPFELKKIIVSDLRLLTLLEAGLPSWVIFFQSYPVFCHMYRPWMCPLARALYVIISMVTVVIGFYDLYKNVPVLKATASRLWGPLLIGSRRGRWCRG 243
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03106 243 MobiDBLite consensus disorder prediction 49 71 - -
Tamo4g03106 243 MobiDBLite consensus disorder prediction 38 96 - -
Tamo4g03106 243 PANTHER OS05G0597400 PROTEIN 2 86 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03106 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
166040 Tamo1g04404 Tamo4g03106
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr2:88968546 Tamo4g03106 Tamo-Chr4:59910589 dispersed
Tamo Tamo-Chr4:59910589 Tamo7g01281 Tamo-Chr7:19382012 dispersed