AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03121 ATGGATTCTACAAATGCTAATGATAACATCGGCGGAGGAATGAATGTGGAAGAGCTAGATCATGCTCTTAGGGTGGAAATGGCATCCACCGACGGTTCGGATTTAGGTTCGGAGGATCATATAGCACCTCTTTTGACACAGCCGGAGAAACCCCCGCTCAATATCTTCTCTGTCTCATACCCTAAACTGAAAACTAACAAGGACCAAATTTCGAGATTAATTGAACCGGAACCTTCACCGTTTAATCAGTTCATAATGTGGTCATGGAGTGGATCTAGATATTCTGGTTTGGTATGCATGGCCTTATCGTCTTCCATCTACTGTTTCATGGGAATCATGTCCGATGTATTCTCCGCTCAAGCAATTCCTCTTTTTGAGATAGCATTTGCAAGATGCATAATAATCTCAGCATTATCATTCATATGGTTAAGAAGAACCACACAACCAATTTTCGGACCTCCAAATGTCAGGAGTCTGTTTCTTTTAAGAGCTATTACTGGCTGTATTTCTTTGATAACTTTCATTTACAGCATTCAAAGGTTACCATTCTCTCTAGCCATGTTATTGAGCTTTACAACTCCATTAATGGCTTCAATATCTGCAAAATTCATTCTCCATGAGGATTTCACTCTTTCAGAAATAGCAGCCATTGTTTCCAGTTTCTTTGGTGCAATCTTTATCATCAGATCAACGGTCAGCGTGCAAGGTACAGAAGAAGGTCAACAAGTTCATGGAATACATTACTTTTATGTGTTTCTGATTGGTGTATTGTCATCATTGAGTGGTGGAATGAGTTATTGTTTTATAAGGGCTGGAGCAAATCAGTCTGATCAACCTGTGGTGACTATATTTTCATTTGGTTTACTATCTTGTCCTGCTGCAGCAATATGCATGATCACATTTGATGATTTTGTGGTGCCTAGCTTTCATTCTTTCATTCTTATGGTCATACTTGCCATTTTGGCATTCATTGCTGAGGTGGAATTTTGA 990 39.29 MDSTNANDNIGGGMNVEELDHALRVEMASTDGSDLGSEDHIAPLLTQPEKPPLNIFSVSYPKLKTNKDQISRLIEPEPSPFNQFIMWSWSGSRYSGLVCMALSSSIYCFMGIMSDVFSAQAIPLFEIAFARCIIISALSFIWLRRTTQPIFGPPNVRSLFLLRAITGCISLITFIYSIQRLPFSLAMLLSFTTPLMASISAKFILHEDFTLSEIAAIVSSFFGAIFIIRSTVSVQGTEEGQQVHGIHYFYVFLIGVLSSLSGGMSYCFIRAGANQSDQPVVTIFSFGLLSCPAAAICMITFDDFVVPSFHSFILMVILAILAFIAEVEF 329
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03121 329 PANTHER ACYL-MALONYL CONDENSING ENZYME-RELATED 86 326 - GO:0016021(PANTHER)
Tamo4g03121 329 Pfam EamA-like transporter family 96 228 IPR000620 GO:0016020(InterPro)
Tamo4g03121 329 SUPERFAMILY Multidrug resistance efflux transporter EmrE 131 230 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03121 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
166038 Tamo1g04401 Tamo4g03121
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr1:105957050 Tamo4g03121 Tamo-Chr4:60292948 dispersed