Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo4g03131	ATGAACGAGTCTTTTATCATCGAGTCAGACACACCATCGTGGCCGAGTTTGAAGGAGGTGGAGAAGATCATAGAGTATGAATTCAAAAACAAAGACTTGTTGAAAGAAGCTTTTACTCATAATTCTTACAAAGATGACAATACTTGTCCATCTTATGATCGACTAGAGTACCTTGGTGACTCGTTTTTGAACCTTATGATTGCTAAAGAACACTATTTCCTCTACCCCAAGCTGACTTCTGGTGAGTTGACTCGGCTGCGTGCTGCCAATATCGATACCGAAGCATTGGGTCGTGCTACATTCAAACATGGCTTACATAGGTTTCTCAGGCACCATGATCATTTATTCGATGAACGGATTCAAGAACTCATGGAAGGAATCAAGGAATACCCCTTGCACTCTACTGGTTTGATCCATTCGCCTAAAATCTTTGCAGACATTCTCGAGTCTCTTGTTGGTGCTATCTACGTTGACACCAATTTATCGGTTGATACAACATGGGAGGTGGTGAAGAACTTGTTACAACCTTTGGTCATACCAGAAAACCTTAATTTAAACCCGGTTACGAGGTTGAACGAAATGTGTCAGAAGGTTGGGATCAAAACAGAATACAAAGATTTATGGGTCGAAAGCGGCGAAATTGAAATATATGTAGGTGATAAGTTAATTGGGAGAGGAAAAAACAAGAACAAGAAAACGATCGCAAAGAATAAAGCAGCAGCCCAAGCATATGAAATTCTTTTCAAACAACCGGGTGTGAACGATGAGTCCACTTGTTTTTGA	783	40.49	MNESFIIESDTPSWPSLKEVEKIIEYEFKNKDLLKEAFTHNSYKDDNTCPSYDRLEYLGDSFLNLMIAKEHYFLYPKLTSGELTRLRAANIDTEALGRATFKHGLHRFLRHHDHLFDERIQELMEGIKEYPLHSTGLIHSPKIFADILESLVGAIYVDTNLSVDTTWEVVKNLLQPLVIPENLNLNPVTRLNEMCQKVGIKTEYKDLWVESGEIEIYVGDKLIGRGKNKNKKTIAKNKAAAQAYEILFKQPGVNDESTCF	260

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo4g03131	260	ProSitePatterns	Ribonuclease III family signature.	53	61	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Tamo4g03131	260	SUPERFAMILY	RNase III domain-like	16	178	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Tamo4g03131	260	ProSiteProfiles	Ribonuclease III family domain profile.	17	160	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Tamo4g03131	260	PANTHER	DICER-RELATED	15	248	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Tamo4g03131	260	Gene3D	-	184	258	-	-
	Tamo4g03131	260	SMART	DRBM-3	187	248	IPR014720	-
	Tamo4g03131	260	SUPERFAMILY	dsRNA-binding domain-like	142	252	-	-
	Tamo4g03131	260	Pfam	Ribonuclease III domain	53	159	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Tamo4g03131	260	FunFam	Endoribonuclease dicer-like 1	12	181	-	-
	Tamo4g03131	260	Gene3D	Ribonuclease III domain	14	183	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Tamo4g03131	260	SMART	riboneu5	32	183	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Tamo4g03131	260	CDD	RIBOc	32	178	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Tamo4g03131	260	Pfam	Double-stranded RNA binding motif	187	247	IPR014720	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo4g03131	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	166037	Tamo1g04395	Tamo4g03131

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Tamo	Tamo-Chr1:105893126	Tamo4g03131	Tamo-Chr4:60409765	dispersed
	Tamo	Tamo-Chr4:60409765	Tamo4g03324	Tamo-Chr4:64622745	dispersed
	Tamo	Tamo-Chr4:60407336	Tamo4g03131	Tamo-Chr4:60409765	tandem