Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g03137 | ATGGCTTCAAGTTCCGAAATAGGGCTTGCAGCTACCATAAACATCCTCACCGCATTTGCATTTCTGGTTGCATTTGCCATACTTCGAATCCAGCCTTTCAACGATAGAGTTTACTTCCCAAAATGGTACCTAAGGGGACTAAGGAACAATCCACTTCAATCAGGCGCATTTGTGCAGAAGTTTGTAAACTTGGATTTCAGATCATACTTGAAGTTCCTCAATTGGATGCCTGCTGCATTACGCATGCCAGAGCCTGAGCTAATCGATCACGCTGGATTAGACTCTGTTATCTACTTGAGAATTTACTTAACCGGACTCAAGATCTTTGTACCGATTGCATGCCTAGCTTTCACTGTTATGGTTCCCGTCAATTTTACTAATAAAACTTTGGAGGAATCTAAGTTAACATATAGTGACATAGACAAGCTTTCAATATCCAACATTCCCACTGGATCAAACAGGTTCTTTACACATTTAGTGATGGCATACGCCTTTACCTTTTGGACATGTTATATTTTAAAAAGAGAATACGAGAAAGTTGCAACAATGAGGTTGCATTTTATCTCATCAGAACATCGAAGACCCGATCAATTCACTGTATTGGTCAGAAATGTCCCCCCAGACCCTGACGAATCGGTCAACGAACTAGTGGAACACTTTTTTCTAGTCAACCATCCCGATAACTATCTATCTCATCAGGTTGTTTACAATGCGAACGTGCTCTCTGATTTGGTAAACGAGAAGAAAACGAAGCAGAATTGGCTTGACTATTATCAACTCAAATATAACAGAAATAACCAGTCAAAAAGACCATCAGTAAAGACTGGTTATCTTGGTTTATGGGGAAAGAAGGTGGATGCTATTGAGTATTATGAATCGGAGGTCGAGAAACTATCGAAAAAAATATGTAAAGAGAGGGAAAAGGTTACGAAAAGCTCGAAGCATGTCATGCCGGCGGCGTTTGTTTCGTTTAAAACACGATGGGGAGCTGCGGTCTGTGCACAAACCGAACAATCGAGGAATCCGACTATCTGGTTAACAGAATGGGCTCCAGAACCTCGTGATGTTTACTGGGATAATCTCGCGATTCCGTTCGTTTCACTCACGATTCGGAGGCTCGTAATTGCTGTCGCGTTTTTCTTCCTTACGTTCTTCTTCATGATTCCGATCGCATTCGTACAGTCGCTGGCGAACATCGATGGTATCGTGAAAGCCGCTCCGTTTTTACAGGGCGTTCTCGAAGTGGAATTTGTTAAATCGTTTATCCAAGGTGTTCTTCCTGGAATCGCGTTGAAGATCTTCCTGATTTTTCTACCTTCGATCCTCATGATGATGTCGAAGTTTGAAGGATTCACCTCGATTTCAGCTCTCGAGAGAAGATCCGCTACTCGATATTACATCTTCCAGTTCATCAACGTCTTCCTCGGCAGCATAATCACCGGAACCGCATTTCAACAGCTAAACACCTTCATCCACCAGTCTGCAAACACAATCCCGATCACAATCGGTGCATCTATACCAATGAAGGCGACCTTCTTCATAACATACATCATGGTAGACGGATGGGCTGGAGTCGCAGGCGAGATTCTCAGGTTAAAACCGCTAATATTCTACCACTTGAAGAATTTCTTCTTAGTGAAAACCGAGAAAGACAGAGAAGAAGCCATGAATCCCGGTAGCTTACCTTTCAGCACCGGCGAACCTCAAATCCAGCTTTACTTCTTACTCGGACTTGTTTATGCCGTCGTCACCCCCATTCTTCTTCCTTTTATCGTCGTATTCTTCGGGTTGGCTTACGTCGTATACCGCCATCAGATTATAAACGTATACAATCAACAATACGAAAGTGCGGGAGCTTTCTGGCCGGACGTTCATGGTCGGATTATAACCGCACTGATTGTTTCACAGCTTCTCTTAATGGGCCTACTGAGCACAAAAGAAGCGGCCCAATCAACCCCATTACTCATCGTACTCCCTATCCTCACAATCTGGTTTCATAGATTCTGTAAAGGAAGATTCGAACCCGCGTTCGTTAGGTACCCTTTACAGGAGGCTATGATGAAAGATACGTTGGAAAGGGCAAGGGAGCCGGGCTTGAATGTGAAAGGATACTTACAAGACGCGTATGTACACCCGGTGTTTAGTAACTGGGATGGGAGTGATGATGGAGTGAGTGATGATGATGAGTGGCCGAAAGAGCCGGCTCTGGTCCCCACAAAGCGTGAGTCGCGAGTCAACACGCCAGTCAGGAGTCAGAGGAGTGAGTCATCGCGGACACTGTTGTGTGTCTTGGATGAAAGATCGTGTCCGTGA | 2313 | 44.31 | MASSSEIGLAATINILTAFAFLVAFAILRIQPFNDRVYFPKWYLRGLRNNPLQSGAFVQKFVNLDFRSYLKFLNWMPAALRMPEPELIDHAGLDSVIYLRIYLTGLKIFVPIACLAFTVMVPVNFTNKTLEESKLTYSDIDKLSISNIPTGSNRFFTHLVMAYAFTFWTCYILKREYEKVATMRLHFISSEHRRPDQFTVLVRNVPPDPDESVNELVEHFFLVNHPDNYLSHQVVYNANVLSDLVNEKKTKQNWLDYYQLKYNRNNQSKRPSVKTGYLGLWGKKVDAIEYYESEVEKLSKKICKEREKVTKSSKHVMPAAFVSFKTRWGAAVCAQTEQSRNPTIWLTEWAPEPRDVYWDNLAIPFVSLTIRRLVIAVAFFFLTFFFMIPIAFVQSLANIDGIVKAAPFLQGVLEVEFVKSFIQGVLPGIALKIFLIFLPSILMMMSKFEGFTSISALERRSATRYYIFQFINVFLGSIITGTAFQQLNTFIHQSANTIPITIGASIPMKATFFITYIMVDGWAGVAGEILRLKPLIFYHLKNFFLVKTEKDREEAMNPGSLPFSTGEPQIQLYFLLGLVYAVVTPILLPFIVVFFGLAYVVYRHQIINVYNQQYESAGAFWPDVHGRIITALIVSQLLLMGLLSTKEAAQSTPLLIVLPILTIWFHRFCKGRFEPAFVRYPLQEAMMKDTLERAREPGLNVKGYLQDAYVHPVFSNWDGSDDGVSDDDEWPKEPALVPTKRESRVNTPVRSQRSESSRTLLCVLDERSCP | 770 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g03137 | 770 | PANTHER | PROBABLE MEMBRANE PROTEIN DUF221-RELATED | 8 | 718 | IPR045122 | GO:0005227(InterPro)|GO:0005227(PANTHER)|GO:0005886(PANTHER) | |
| Tamo4g03137 | 770 | Pfam | Late exocytosis, associated with Golgi transport | 9 | 176 | IPR032880 | - | |
| Tamo4g03137 | 770 | Pfam | Calcium-dependent channel, 7TM region, putative phosphate | 371 | 643 | IPR003864 | GO:0016020(InterPro) | |
| Tamo4g03137 | 770 | Pfam | Cytosolic domain of 10TM putative phosphate transporter | 197 | 360 | IPR027815 | - | |
| Tamo4g03137 | 770 | MobiDBLite | consensus disorder prediction | 721 | 757 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g03137 | K21989 | calcium permeable stress-gated cation channel |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr4:60451899 | Tamo5g01064 | Tamo-Chr5:14698070 | dispersed | |
| Tamo | Tamo-Chr1:140830 | Tamo4g03137 | Tamo-Chr4:60451899 | transposed | |
| Tamo | Tamo-Chr7:13495349 | Tamo4g03137 | Tamo-Chr4:60451899 | transposed | |
| Tamo | Tamo-Chr7:58769009 | Tamo4g03137 | Tamo-Chr4:60451899 | transposed | |
| Tamo | Tamo-Chr4:60451899 | Tamo7g00446 | Tamo-Chr7:5848453 | wgd |