AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03144 ATGGCGGAAACCCTAAGCCCTAGCCGTACACCGGGACACAAACAAAGAGCGCCGGTCCTCTCTCCGGATCGACCTTTATTTTTGGGCTCTAACGACGATGAGCTCGAACGTGCTCAAGCACGCGCCGCTCGTGCTGCAGCTATCCGCCGGAAGCCTGTGGCGTTGCATCAAGCAACCGATGCTAATCCTGCCGACCCATGTCTTGGCCAAGAGCAGATTATGGAACTGTTTCAAAATTGCATCAAACTAGCCAGTGAGAATAAAATAAACCAGAAGAATACGTGGGAGCTCAATCTGATAGATCACCTCTGCGACATTATTAAGGTTGAAGAAGAGAACGATCTGGAGACGAATTTCCAAAAGGCTAGCTGCACCCTTGAAGCTGGAGTTAGAATATATTCAATGAGGGTGGATTCAGTTCATTCTGAGGCATATAAGGTTCTTGGAGGTATTAGTAGAGTTGCACTGGATGCTGAGCAAGATACTGTAGATGATAACAACACTGACAACATGCCTGGAGAACGCACTTCAAAGAAAGAAAAGGAACTAAAGTTATCTCCTTTATCTACATTGGAATCATCTTTTGAGGCTCTTAATGTGAAGAAATTTGATGTTGCATTTGCTGTGGACCCTTTGTACCATCAAACAACTGCACAATTTGATGAAGGAGGATCAAAGGGTCTTTTACTAAATAACCTTGGAGTCTATGGTGGATGTAGAATGATATTTGATTCACTTGAAGTACCTTCAAAGTGCATGTCATCTTCAAATGAACATAAACTAGATACAATCGACATATCTTTTACCAAAGATTGTATAGAACAAATGTCATCAACCTTTTCAAAGAAACTTGAAATCTCACCAAGTTTGAAGGAAATAGTCAACATGTTTGATGAAGATAACAAAAGACCAGTGGATACGTTTTCTTCTTCCCAAATCTCAATAGAACCAGAATGTGATGAAGCTTTTGAAGGCAGCTTTAATGGAGGTGAAAATGAAAATGAAAATGATAATTCAGGAACATGGGATTATATAAATGACAACCAAACAAACATAAATGATGATGATGACACTTATGAAGGAGATGAAGCACACTTTGAAACTCTTCATCATCAGGAAAACGAACCGTATGGTAATTATGATGATGATGAAAAATCATCAACAGTTGACAGTTTCTTGTTTTTAAGTCTTGGATTAAATGGAAAACGAAACGCGTGGGCGGGCCCCGAACATTGGAAGTACCGCAAGACTAAAGGTACAGAAGAAGGTGTGAAGGAAAATGGAGCACCAATAATGGCGAAAACCAAAAGAAATAATACAAAAAAACAAGAACCGGATATTGATTTTATAAAAGCATTGGAAATGGATTATGATTTTGAAAGTATATTTGCACCTCCTAAAAACCCTAAATCATTGTTGTTGCCTGCAAATAGAGAGCCATGTAACACAATGCTTCCGGAAGATTGCCATTATCAACCCGAAGATCTTGTCAAGCTTTTTCTTCTCCCAAATGTTTTGTGCCTTGGGAAAAGAGGAAGGAGGTATACTGAGGAATCTGGTCAAGAAGGAGAAGGGAATAACAACAATGAAACATTTGATAATTGGGAGAATGATTGTGGTGGATTTGATGATGGAAATGGAAATGTTTATAGTGATAATGAGGAATCTACCACACTTGTCTCTCAACCCCGCCAGGTAAAGAAGATTGAAGTGGAGTATGATAGAACATCTAAACAAGTTGATGTTCAAGCACTCAAAGAAATCCTTTGGTCATCTATCCAGGAAACACATGGATCAGATCAAGAGAGAGAGTCAGAGGAGGGATTATCATTCAAGAAAATGTTGGGATGTTTTCCAAGTGACGTAAAGAAACCAGCAGCCGCATCCATAGATGCAATTTCCCCACATTTGTGTTTTATATGTTTGCTTCATTTGGCAAATGAACATGGATTGAGCATCCATGGATGTGACAATTTGGATGATCTCACCATACACCTTCCCTCCTAA 2007 39.61 MAETLSPSRTPGHKQRAPVLSPDRPLFLGSNDDELERAQARAARAAAIRRKPVALHQATDANPADPCLGQEQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDLETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVALDAEQDTVDDNNTDNMPGERTSKKEKELKLSPLSTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMIFDSLEVPSKCMSSSNEHKLDTIDISFTKDCIEQMSSTFSKKLEISPSLKEIVNMFDEDNKRPVDTFSSSQISIEPECDEAFEGSFNGGENENENDNSGTWDYINDNQTNINDDDDTYEGDEAHFETLHHQENEPYGNYDDDEKSSTVDSFLFLSLGLNGKRNAWAGPEHWKYRKTKGTEEGVKENGAPIMAKTKRNNTKKQEPDIDFIKALEMDYDFESIFAPPKNPKSLLLPANREPCNTMLPEDCHYQPEDLVKLFLLPNVLCLGKRGRRYTEESGQEGEGNNNNETFDNWENDCGGFDDGNGNVYSDNEESTTLVSQPRQVKKIEVEYDRTSKQVDVQALKEILWSSIQETHGSDQERESEEGLSFKKMLGCFPSDVKKPAAASIDAISPHLCFICLLHLANEHGLSIHGCDNLDDLTIHLPS 668
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03144 668 MobiDBLite consensus disorder prediction 1 26 - -
Tamo4g03144 668 PANTHER CONDENSIN COMPLEX SUBUNIT 2 15 666 IPR022816 GO:0000796(InterPro)|GO:0000799(PANTHER)|GO:0003682(PANTHER)|GO:0007076(PANTHER)|GO:0007076(InterPro)
Tamo4g03144 668 MobiDBLite consensus disorder prediction 160 180 - -
Tamo4g03144 668 Pfam Condensin complex subunit 2 24 521 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Tamo4g03144 668 Pfam Condensin complex subunit 2 530 664 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Tamo4g03144 668 PIRSF Condensin-H 539 668 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Tamo4g03144 668 PIRSF Condensin-H 5 556 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03144 K06676 condensin complex subunit 2