AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03146 ATGGCATTGAATAGGGCTGGATCGTGTAATCCGGCCGTCGTGAAGATCGGAATTACGTTCTTGGGACTGTGCTTGGTCGGTTATCTACTAGGTCCACCTCTATACTGGCATGTTCTTGAAGGGTTAGCCGCCGTCCGCCGCTCCTCCTCCGCCGCTTCCTGTCCTCCCTGCAACTGCGATTGCGATACTCAGCCACTCCTCTCAATTCCCCAAGCATTAAGCAACGGTTCCTTCACAGATTGTGCAAAACACGACCCTGAAGTCACCGGAGACACAGAAAAGAATTTTGCGGAGCTTCTATCAGAAGAACTAAGGCTACGTGAATCGGAAGCTCTAGAAAGCCAACAACGTGCTGACATGGCACTTCTGGAGGCCAAAAAGCTAACATCTCAGTATCAGAAAGAAGCCGATAAATGCAATTCAGGTATGGAAACTTGTGAAGAAGCTCGTGAAAAAGCAGAAGGAGCTTTGTTATTACAGAAAAAACAAACGCAAATGTGGGAATTGAGAGCACGACAAAAGGGATGGAAGGATGGTGGGAATGTTAAATCTGTAAACACTATATGA 567 47.09 MALNRAGSCNPAVVKIGITFLGLCLVGYLLGPPLYWHVLEGLAAVRRSSSAASCPPCNCDCDTQPLLSIPQALSNGSFTDCAKHDPEVTGDTEKNFAELLSEELRLRESEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEGALLLQKKQTQMWELRARQKGWKDGGNVKSVNTI 188
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03146 188 PANTHER EXPRESSED PROTEIN 1 184 - -
Tamo4g03146 188 Pfam Protein of unknown function (DUF1068) 12 178 IPR010471 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03146 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
166337 Tamo2g00085 Tamo4g03146
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr1:88635847 Tamo4g03146 Tamo-Chr4:60686673 dispersed
Tamo Tamo-Chr4:60686673 Tamo5g00171 Tamo-Chr5:2793515 dispersed
Tamo Tamo-Chr2:2027351 Tamo4g03146 Tamo-Chr4:60686673 wgd