AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03154 ATGGCAACCCCGATCAGAAAATTTACCAAACTATCCTTCATCATCATCTTGCTCATATCCTTTCTTACGTTTTTGAAGGGCGATGAACTAGGCGAGCTCAAACGGTCCTCCATGACTCTTTACTTTCAAGACTATTTTGGTGGACCAAATGCCACCATGAAACCAGTCACCTTCTCTGCTGACGCATGGTCCTTCAAACAATTTGGGACCATATTTTGTACGGATGACCCAATAACTGTAACCATGGATCAGGGTTCGGCCGAAATAGGCCGAGCCCAAGGAATATACGTTACATCTGCGTTGGATGGGTCCAACTCACATGTCCTGATATCGCTTGTGTTCACTAACAAGGAGTTTGGTGGTAGCACGTTGGAGGTGCAAGGGGCTAGCAAGCAGTTTGAGAGGGTGAGAGAGGTTGCAGTGGTTGGTGGCACTGGAAAATTTCGATTGGCTAGAGGTTATGCCACCTTTGAGACTGTTCATCTTGATTTATCGTTATCTTACTCGATCATTGAGGGCAACTTTACTGTATGGCATTACAAAAACGACGGAAAGACTCTATGA 564 45.21 MATPIRKFTKLSFIIILLISFLTFLKGDELGELKRSSMTLYFQDYFGGPNATMKPVTFSADAWSFKQFGTIFCTDDPITVTMDQGSAEIGRAQGIYVTSALDGSNSHVLISLVFTNKEFGGSTLEVQGASKQFERVREVAVVGGTGKFRLARGYATFETVHLDLSLSYSIIEGNFTVWHYKNDGKTL 187
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03154 187 Gene3D - 31 175 IPR044859 -
Tamo4g03154 187 PANTHER NUCLEOPORIN-RELATED 13 174 IPR004265 -
Tamo4g03154 187 Pfam Dirigent-like protein 37 177 IPR004265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03154 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:60877978 Tamo8g01592 Tamo-Chr8:20704441 dispersed
Tamo Tamo-Chr1:10861807 Tamo4g03154 Tamo-Chr4:60877978 transposed
Tamo Tamo-Chr4:60877978 Tamo8g00340 Tamo-Chr8:4588184 wgd