Gene detail

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo4g03175	ATGACTCAGATTAGCAAAAAAATGTATGCATTAGACCTCAAGAGAACGATTCTATGGCGTGTAGCTCTTCTCCGGCGATGTGCTAAATCTCTCTGGCACCAAATTCTTGCTTGTTGGATCGGAAAATCTGTCCGGTACCGGCAATTATTACACCCCGGCCCTTTGATTCCGACGTCTCATCGACGGCCTTCTCCCGTGGAGACAACAACGACGACGATCGATATGGCCACCGCGAACCACCAGTCTCCATCCGGCGAAATGTCGTCGTCCTCCGGCAGCTCCGATCATGATCAAGATACTTCTGATTTGGTGGCGTTGAAGATTAGCCTGTTGGGTGATCATCATATCGGAAAAACAAGCTTCTTGGCAAAGTACGTTGGGAAAGAAAAGAATCAAGAAGAATTACAAGATAAAGGCACTAATCACATGGATAAAACACTATGTGTTAAAGGAGCCAGGATCAACTACACTATTTGGGAAGTCGGTTGTGATGCATTTTGTCCAGTTTGTGTAGATGGCGATTTGAGGACGTCGATTCCTGCTGCTTGTAAAGACTCAGTAGCAATGTTGTTCATGTTTGATCTAACAAGTCGTTGTACACTTAATAGTGTTATCAATTGGCATCAGCAAGCTAGGACTTATAATCAGAACGCGATTCATGTGATGGTTGGTAGCAAGTTTGACGAATTTGTGCAACTTCCGTTGGATTTACAATGGACAATCGCAAGTCAGGCAAGAGCATATGCAAAGGCTATAAATGCGACACTCTTCTTCTCAAGTGCATCTTACAATATAAATGTAAATAAAATCTTTAAGTTCGTAACCGCAAAGCTCTTTGATTTGCCATGGACTTTGGAGCGAAATCTTACAATTGGCGAGCCTATTATTGATTTCTGA	897	42.92	MTQISKKMYALDLKRTILWRVALLRRCAKSLWHQILACWIGKSVRYRQLLHPGPLIPTSHRRPSPVETTTTTIDMATANHQSPSGEMSSSSGSSDHDQDTSDLVALKISLLGDHHIGKTSFLAKYVGKEKNQEELQDKGTNHMDKTLCVKGARINYTIWEVGCDAFCPVCVDGDLRTSIPAACKDSVAMLFMFDLTSRCTLNSVINWHQQARTYNQNAIHVMVGSKFDEFVQLPLDLQWTIASQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWTLERNLTIGEPIIDF	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo4g03175	298	SMART	rab-sub-5	106	281	-	-
	Tamo4g03175	298	Gene3D	-	94	287	IPR027417	-
	Tamo4g03175	298	Pfam	Ras family	107	277	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Tamo4g03175	298	PRINTS	Transforming protein P21 ras signature	106	127	-	-
	Tamo4g03175	298	PRINTS	Transforming protein P21 ras signature	256	278	-	-
	Tamo4g03175	298	PRINTS	Transforming protein P21 ras signature	216	229	-	-
	Tamo4g03175	298	ProSiteProfiles	small GTPase Rab1 family profile.	97	298	-	-
	Tamo4g03175	298	PANTHER	-	104	297	-	GO:0003924(PANTHER)\|GO:0005525(PANTHER)
	Tamo4g03175	298	MobiDBLite	consensus disorder prediction	78	99	-	-
	Tamo4g03175	298	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	106	290	IPR027417	-
	Tamo4g03175	298	FunFam	Septum-promoting GTP-binding protein 1	96	288	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo4g03175	K07976	Rab family, other

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Tamo	Tamo-Chr4:61379656	Tamo7g04310	Tamo-Chr7:86743898	dispersed