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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03192 ATGGTGGATCCTGCAGCTGTTTTTGGAATGGTATTTGGTAGTGATTTGTTCGAAGAATATATCGGGGAGCTTTATATGGCTTCTATACAGACTGTAGAGCTTGAAGAAGAGTCAAAGGCTCCTGAAATTCGTAGAGCAAAAATTCAAGAGAGGATGAAGGCATTACAAAAAGAGAGAGAAACTAGACTCATAGCAAATCTTAAAGATCGCCTTCGACCTTTTGTTGAAGGCCAGACAACCGAGTTTGTAGATTGGGCCACATCAGAAGCTCATCGCCTTTCACCGGCAACTTTTGGTGAGGCAATGCTACATACGATTGGTTACATATACACAAGGCAGGCTGCAAAAGAACTAGGAAAAGATAGAAGGTATATGAATGTCCTATTTTTAGCAGAGTGGGTTAGGGATAAGGGACACAAGATTAAATCACAAGTTTCGGCCGCTTCAGGTGCGGTTCAGTTAATTAATACAGTTGTGGAGCTGAAGAAACTGAATGAATCAAAAGCCAAAGAAGAGGAAATAATAAAAGCTATTGAAAGCAAAAAAGACGCAATGTTTAATTCCTTGTGGCAGCTCAATGTTGTGGATATTGAGACAACTTTGTCCCATGTTTGTCATGCGGTGCTTAGAGAGCATAATGTTCCAAAGGATATCCTAAGGAAACGAGCTAGAGGAATGAAGAAGCTTGGAACAATATTCCAAGGAGCAAAGTCAACTTACCGTAGACAGAACAGTTTACGCGAAGAAAGCCCGGTGGAAAAACCTGAAGCTTCATCTTCTTCATCCAAATAG 792 40.78 MVDPAAVFGMVFGSDLFEEYIGELYMASIQTVELEEESKAPEIRRAKIQERMKALQKERETRLIANLKDRLRPFVEGQTTEFVDWATSEAHRLSPATFGEAMLHTIGYIYTRQAAKELGKDRRYMNVLFLAEWVRDKGHKIKSQVSAASGAVQLINTVVELKKLNESKAKEEEIIKAIESKKDAMFNSLWQLNVVDIETTLSHVCHAVLREHNVPKDILRKRARGMKKLGTIFQGAKSTYRRQNSLREESPVEKPEASSSSSK 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03192 263 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 249 IPR052423 -
Tamo4g03192 263 Pfam X-domain of DnaJ-containing 56 246 IPR026894 -
Tamo4g03192 263 Coils Coil 161 181 - -
Tamo4g03192 263 MobiDBLite consensus disorder prediction 239 263 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03192 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
166345 Tamo2g00134 Tamo4g03192
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr3:92787137 Tamo4g03192 Tamo-Chr4:61689541 dispersed
Tamo Tamo-Chr4:61689541 Tamo5g04339 Tamo-Chr5:92909168 dispersed
Tamo Tamo-Chr2:2870527 Tamo4g03192 Tamo-Chr4:61689541 wgd