AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03271 ATGCCAATTTATTTCGCGAAAAACGATCCTTCAACAACTCCTCGTTTACTCACAAAAGAACAATCCAATTCAATCCCTTTTTCCTCATCAAATCTCCCATATCTTCTTGACCTTTTATCCTTGACCAAAGACTCACCACAAGCAAAAGCCATGGACCAAACCCTCAAACAATGCGAGCTTGAACCGACACCTGGCGAGACAAGATTCTGTGCAACCTCGTTGGAATCGATGCTTGACTTGACACGTGAGGTATTGGGTATGGTCAAACTGAAGGTGTTGACCACGAACATCCATAATTTGACGGTTCCTGATATGGTGGCTTGTCATACCATGGCTTATCCTTACGCGGTTTACTATTGTCATGCTCAAAAGGGGTATAATAGGGCTTTTAAGATTTCTCTAGGGGGTGAAAATGGAAATAAAATTGATGCTATTGCTGTTTGCCACATGGACACGTCCAAGTGGGACCGTGACCATGTGGCGTTCCGTGTGCTTGGTGTCCAGCCTGGCACTTCACCTGTTTGTCATTTTCTCCCTGCGGATAACATCATGTGGATCCCGTCGGTGTAG 570 45.09 MPIYFAKNDPSTTPRLLTKEQSNSIPFSSSNLPYLLDLLSLTKDSPQAKAMDQTLKQCELEPTPGETRFCATSLESMLDLTREVLGMVKLKVLTTNIHNLTVPDMVACHTMAYPYAVYYCHAQKGYNRAFKISLGGENGNKIDAIAVCHMDTSKWDRDHVAFRVLGVQPGTSPVCHFLPADNIMWIPSV 189
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03271 189 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 1 188 IPR044816 -
Tamo4g03271 189 Pfam BURP domain 1 186 IPR004873 -
Tamo4g03271 189 ProSiteProfiles BURP domain profile. 1 188 IPR004873 -
Tamo4g03271 189 SMART BURP-2 1 188 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03271 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr4:62865824 Tamo4g03271 Tamo-Chr4:63380634 dispersed
Tamo Tamo-Chr4:63380634 Tamo8g01292 Tamo-Chr8:17086998 dispersed