Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g03277 | ATGTCGATCCTAGGTGCGAATATCCCCAGCGAGGTTGGTCTGCGATTGCTTCTTTGCCCACTTGGATCCAACATTGTCCTGAAAACAGCATGCTGTTCTGTAGGAGTTATAATACCAGTTTACTCTACATTTAAAGCAATTGAGACAAATAATACAACTGATCAACAAAAGTGGCTCTTATATTGGGCAGCATATGGGAGTTTTAGCATAGCAGAAGCATTTGCAGACAAAATAATATCATGGTTTCCACTTTACCATCACATGAAATTTGCTTTTCTTGTTTGGCTTCAACTTCCCACTACCAATGGTGCTAAGCATATTTATATGAATCATTTACGTCCTTTCCTTTTAAGGCATCAAGCTAACCTCGATCAAATTGTGGGAATCTTGTACAACGAAACCGGTAAATTTGTTAGTGCTCACGAAGGAGAATTCCGGTTCATAAAGGCAATTGTGATGAAGATTCTGATATCAGCAAAGCATATTATCAATGATAGTAGTCAACCGGTCCCACCACCAGAGGGAAGGGCAATTACGGGATTAAGTGAAGAAATAACTAGCTCTGATGATGAAAATGGTGATGAGGGTTATGTAACTGTGCCTGCAAATCAACTAAATGTTTAA | 624 | 39.1 | MSILGANIPSEVGLRLLLCPLGSNIVLKTACCSVGVIIPVYSTFKAIETNNTTDQQKWLLYWAAYGSFSIAEAFADKIISWFPLYHHMKFAFLVWLQLPTTNGAKHIYMNHLRPFLLRHQANLDQIVGILYNETGKFVSAHEGEFRFIKAIVMKILISAKHIINDSSQPVPPPEGRAITGLSEEITSSDDENGDEGYVTVPANQLNV | 207 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g03277 | 207 | PANTHER | HVA22-LIKE PROTEINS | 35 | 129 | IPR004345 | - | |
| Tamo4g03277 | 207 | MobiDBLite | consensus disorder prediction | 166 | 198 | - | - | |
| Tamo4g03277 | 207 | Pfam | TB2-DP1, HVA22 family | 39 | 115 | IPR004345 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g03277 | K17279 | receptor expression-enhancing protein 5/6 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr2:3721856 | Tamo4g03277 | Tamo-Chr4:63468214 | dispersed | |
| Tamo | Tamo-Chr4:18290332 | Tamo4g03277 | Tamo-Chr4:63468214 | dispersed | |
| Tamo | Tamo-Chr4:63468214 | Tamo8g01561 | Tamo-Chr8:20402306 | transposed |