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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo4g03279	ATGTTCTTCAGCTTCACACCTTTTAAAGGCATGAAATCAAAAATCGTTCCTTACTACATGAACGGAAATCCATCCAGTCTCTTCTGCATCTTGCCAAGAGACGATTCTTCCCGCTTTTTCCCTCCGGGCACCGCCCCTGTTTACCTCAACGTCTACGACATCTCCACCATCAACAGTTGCATATCATGGACAGGCATCGGCGCCTTTCACACAGTTCATGGCGTGGAATATGGTTTCGGATGTCATCAAGAATCAGAAAGCGGTGTTTTTGAGATCGAACCTCGAAAATGCCCTGGGTTTAAATTCAGGGAGTCGATTTTAATGGGGACAACGAAATTGAGCCCTAGCCAAGTTCAAAGATTCATTGAGCTGCAATCCAATAACTACTATGGCGACACGTACCACTTATTTGGGAAGAATTGCAATCATTTTTGCGACGACATGTGTCACAAATTAACCGGAAATAAAATCCCTAGATGGGTTAATCGACTTGCTAGAATAGGTTCATGTTGCCGATGTATACTTCCGAAATCAATCAAGGGTTCGGCTGTTAAAAACAAATCAAATTCCGATGAAGATGAACACAAGAGTTTACGAGGCTCGTTTAGTTGTTTTTCGTCGTTTTCAGCACATAATAAATTGAGAAAAGTTTCAATATCGTCGTTATATAAACATTCGCTCTATAAAGGATGTCTTCCGCCATGGGAGTTGCAGGTGGACTCGGGAAGGCTTTGCGAAGAAGATGAAGATGTTGAGTGA	759	42.42	MFFSFTPFKGMKSKIVPYYMNGNPSSLFCILPRDDSSRFFPPGTAPVYLNVYDISTINSCISWTGIGAFHTVHGVEYGFGCHQESESGVFEIEPRKCPGFKFRESILMGTTKLSPSQVQRFIELQSNNYYGDTYHLFGKNCNHFCDDMCHKLTGNKIPRWVNRLARIGSCCRCILPKSIKGSAVKNKSNSDEDEHKSLRGSFSCFSSFSAHNKLRKVSISSLYKHSLYKGCLPPWELQVDSGRLCEEDEDVE	252

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo4g03279	252	Pfam	PPPDE putative peptidase domain	46	177	IPR008580	GO:0008233(InterPro)
	Tamo4g03279	252	SMART	DUF862-2a	45	180	IPR008580	GO:0008233(InterPro)
	Tamo4g03279	252	Gene3D	PPPDE domains	41	196	IPR042266	-
	Tamo4g03279	252	ProSiteProfiles	PPPDE domain profile.	45	179	IPR008580	GO:0008233(InterPro)
	Tamo4g03279	252	PANTHER	DESUMOYLATING ISOPEPTIDASE	44	195	IPR008580	GO:0008233(InterPro)\|GO:0016579(PANTHER)\|GO:0070646(PANTHER)\|GO:0101005(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo4g03279	K22763	deubiquitinase DESI2 [EC:3.4.19.12]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Tamo	Tamo-Chr3:63454849	Tamo4g03279	Tamo-Chr4:63535158	dispersed
	Tamo	Tamo-Chr4:63535158	Tamo8g00830	Tamo-Chr8:10969616	dispersed
	Tamo	Tamo-Chr2:79883319	Tamo4g03279	Tamo-Chr4:63535158	transposed
	Tamo	Tamo-Chr4:70577142	Tamo4g03279	Tamo-Chr4:63535158	transposed
	Tamo	Tamo-Chr4:63535158	Tamo8g00439	Tamo-Chr8:6082985	wgd