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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03322 ATGGCATCCGCCTCAGCCTCCGCCACTTTATCTCCGGTCAACTTAACGGTGGTTTCTCCCACCCGCTCCTCCGGGAGAACCACCACCACCGCCACCAAAGTGACATACATCAAGGGGATTAACTCATTCGGCGGCCTTAAAGCTCACAACACCGTCGCCGCATTGGGCCTCCCTGTTTCCACCGAACAGCAATTCGCCAACTTTGTTTGCTCTATGAAGAAACCGTCGTCCAAGAACCTCGCCGGCGGCGGTGGAGCTCTCACCTCCACCTGCAATGCTGTCGGAGAAATTTTCAAGATCGCGGCAATCATGAATGGACTTACTCTTGTCGGAGTTGCAGTTGGGTTTATTCTTCTCCGAATCGAAGCAGCTGTTGAAGAAGCAGAGTAA 390 53.33 MASASASATLSPVNLTVVSPTRSSGRTTTTATKVTYIKGINSFGGLKAHNTVAALGLPVSTEQQFANFVCSMKKPSSKNLAGGGGALTSTCNAVGEIFKIAAIMNGLTLVGVAVGFILLRIEAAVEEAE 129
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03322 129 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 5 129 IPR053333 -
Tamo4g03322 129 Pfam PetM family of cytochrome b6f complex subunit 7 95 122 IPR012595 GO:0009512(InterPro)
Tamo4g03322 129 SUPERFAMILY PetM subunit of the cytochrome b6f complex 94 126 - -
Tamo4g03322 129 Hamap Cytochrome b6-f complex subunit 7 [petM]. 93 125 IPR012595 GO:0009512(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03322 - -