Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo4g03325	ATGGGAGCACTTTTGACAGCTGTTCTTAGACCACGAGAAGCTCAATGTCCTATTGTTAGATGCATTATGCGAGAGCTTTTAACATGCTTGGTTATGGAACCTGCAATGAGATTCGCAAGCCCCGGTCATATTAACGAGTTGATTGAGGGTATTTTTCTTGCCACCAATAAGGGAGAGAAAGACACAGTTGATGATCAATCTAACCCAACAGTAGAAACCCAAAATCAACCTTCTGATAAAAGTCAACCAGAGTCAAACAACGGGTCCTCCAGTAACCAAAAGAGTGAGAAACCATCACCTCCTACCCCCAACAACCAAAAAGAATCAACCACAACTCCCACAATGGCGAGTGGACCCACCACCCAAGATGACTCAACACCCACACGGACATCTGACTGGGCCCGTGTTCTTGAAGCAGCAACCCAAAGAAGAACAGAAGTCTTACAACCTGAAAACCTTGAAAACATGTGGACAAGAGGAAGGAATTACATGAAGAAATCTCAAAAGAATCCTAATGTTGTTGATAGTGGAAGTGACCAGAATTTTGATGAAAGTTTTAGTTTTGATGGTGGAAGTGATGGGAAGTTGAAATGGTCAAATAGTGGATCTGAGTCAAACATTCAAAGTATGACCGAAATTGCATCGCCAATCAATGTTGGTGGGACCATTATACAGGAGTTTTATAGCGTGAATGCTGGAAGAGAGAATGATGTACAAAATGTTAATATTTCTTCTGAAAACAATAATATTAATAATAATAATAAAGTTATACGGACTGAAGGGCATGTTCCAAAGCTTAGGTGTCGGGTTTTAGGAGCATTTTTTGAGAACATTGACTCAAAATCTTTTGCAGTGTATTCAATTGCAGTAACAGATGCTGATAACAAGACTTGGTTTGTAAAAAGAAGATACAGAAACTTTGAAAGACTTCACCGACATCTTAAGGACATTCCCAATTACACATTACATTTGCCACCTAAAAGAATATTCTCATCTAGCACTGAAGATGCATTTGTTCGCCAACGATGTATACAACTTGATAAATATCTCAAAGATCTTTTGTCTATAGCTAATATAGCTGAGCAACATGAAGTATGGGACTTCTTGAGCATGTCTTCAAAGAGTTACTCTTTTGGAAGGTCAACATCGGTAGTCAAAACCTTAGCAGTTAATGTGGATGATGCTGTGGACGATATGGTCCGCCAATTCAAAGGTGGAAAAACACCAAAAGGCGTGGGCCCCGGTTCCCCTTCTGAATCTCCTTATTCATCAGCTCGAAACAGAAACTACTCACCATTAAAGCAGCCGACTTTTGATATGTCAAACATTGTTTCTGACTATGAAGAAGATGGTGGTAATAATAAGACAGCCAAGTATGAGGAAATGGAGTCAATGGGACAAGTTTACGGGGGGTATTTTGACAACGATGTGAATGTTAAAGGGGGAGTTTCACTTTCGCCCAAAGTTGTTAATAAAAATGATGAACAGAATAATAATAACAATAATAATAAAAATTTGGGTTTGGAGAAGAGGAATAGTTCAGAGGTACGATCTGAAATACTTACCATGGCTGCAAATATTCCCACAACTCCTGGCTCAAAGGATGATCCACTTGGTATGCCAGCAGAGTGGAGCCCACCTAATGTAAGTGTTCCTTTGCTAAATTTGGTAGACAAGATATTTCAACTCAACAGAAGAGGCTGGTTAAGACGACAGGTGTTTTGGATGTCAAAGCAAATATTACAACTAATGATGGAAGATGCAATTGATGACTGGCTGTTAAGGCAAATCCATTGGCTTAGGAGAGATGAAGTTGTTGCTCAAGGCATCCGTTGGATCCAAGATATTCTATGGCCGGAAGGCGTGTTTTTTACAAAAGTAAAGGCAAGTGAAACGGAACCTTCTCAAACAAATGAAGCATCATCTTCCCGGGCACCATCGGGCAGCAATAATAAACAACAAGGCTCATTCGAGGAGCAACTCGAGGCTGCCCGAAGAGCTAGCGATATCAAAAAAATGATTTTCAAGGGTGCACCTAGTACATTGGTGAGCTTGATTGGACGTAAGCAATACAAACGATGTGCAAAAGACATATACTATTTTCTTCAGTCTGGCGTGTGCTTGAAGCAACTTGAGTATGGTTTACTTGAACTTGTACTCATAACCATTTTCCCTGAGCTTCAAGAGATTATATCAAATCTTCATGAGAAGGGTCACGGGCAGGGGCATGGGCAGGGGCAGGGGCAGGGGAAGGGGGAGTAG	2262	40.76	MGALLTAVLRPREAQCPIVRCIMRELLTCLVMEPAMRFASPGHINELIEGIFLATNKGEKDTVDDQSNPTVETQNQPSDKSQPESNNGSSSNQKSEKPSPPTPNNQKESTTTPTMASGPTTQDDSTPTRTSDWARVLEAATQRRTEVLQPENLENMWTRGRNYMKKSQKNPNVVDSGSDQNFDESFSFDGGSDGKLKWSNSGSESNIQSMTEIASPINVGGTIIQEFYSVNAGRENDVQNVNISSENNNINNNNKVIRTEGHVPKLRCRVLGAFFENIDSKSFAVYSIAVTDADNKTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVRQRCIQLDKYLKDLLSIANIAEQHEVWDFLSMSSKSYSFGRSTSVVKTLAVNVDDAVDDMVRQFKGGKTPKGVGPGSPSESPYSSARNRNYSPLKQPTFDMSNIVSDYEEDGGNNKTAKYEEMESMGQVYGGYFDNDVNVKGGVSLSPKVVNKNDEQNNNNNNNKNLGLEKRNSSEVRSEILTMAANIPTTPGSKDDPLGMPAEWSPPNVSVPLLNLVDKIFQLNRRGWLRRQVFWMSKQILQLMMEDAIDDWLLRQIHWLRRDEVVAQGIRWIQDILWPEGVFFTKVKASETEPSQTNEASSSRAPSGSNNKQQGSFEEQLEAARRASDIKKMIFKGAPSTLVSLIGRKQYKRCAKDIYYFLQSGVCLKQLEYGLLELVLITIFPELQEIISNLHEKGHGQGHGQGQGQGKGE	753

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo4g03325	753	MobiDBLite	consensus disorder prediction	403	438	-	-
	Tamo4g03325	753	MobiDBLite	consensus disorder prediction	484	512	-	-
	Tamo4g03325	753	MobiDBLite	consensus disorder prediction	67	130	-	-
	Tamo4g03325	753	ProSiteProfiles	PXA domain profile.	1	56	IPR003114	-
	Tamo4g03325	753	MobiDBLite	consensus disorder prediction	417	438	-	-
	Tamo4g03325	753	Pfam	Sorting nexin C terminal	568	704	IPR013937	-
	Tamo4g03325	753	Pfam	PXA domain	3	49	IPR003114	-
	Tamo4g03325	753	Gene3D	-	270	379	IPR036871	GO:0035091(InterPro)
	Tamo4g03325	753	MobiDBLite	consensus disorder prediction	59	130	-	-
	Tamo4g03325	753	SUPERFAMILY	PX domain	266	373	IPR036871	GO:0035091(InterPro)
	Tamo4g03325	753	PANTHER	PX SERINE-THREONINE KINASE PXK	1	739	IPR051837	-
	Tamo4g03325	753	SMART	PX-2	263	372	IPR001683	GO:0035091(InterPro)
	Tamo4g03325	753	Pfam	PX domain	294	370	IPR001683	GO:0035091(InterPro)
	Tamo4g03325	753	MobiDBLite	consensus disorder prediction	629	658	-	-
	Tamo4g03325	753	MobiDBLite	consensus disorder prediction	489	509	-	-
	Tamo4g03325	753	ProSiteProfiles	PX domain profile.	264	376	IPR001683	GO:0035091(InterPro)
	Tamo4g03325	753	CDD	PX-SNX19-like-plant	266	370	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo4g03325	K17925	sorting nexin-13

Event-related genes

Select	Gene_1	Gene_2	Event_name
	166074	Tamo1g04574	Tamo4g03325

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Tamo	Tamo-Chr3:71625520	Tamo4g03325	Tamo-Chr4:64630741	dispersed
	Tamo	Tamo-Chr1:108836980	Tamo4g03325	Tamo-Chr4:64630741	wgd