AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03338 ATGGGGAGTTCTGAAGTCAATCGAGCATGTTCCTACCGGGAAAACGATTCCCCCACCCTAGATGTCGTAATTGCAGACTGTGGAGAAATCAAAGAAGGTGAAGATGATGGAATTGGGAATTTCTTCAAAGACGGAGATGTGTATCCTGATTGGCCTGCTGACATCGACAATGGTCCTGTTGAGCTGTCTTGGTGGTTGGATGCTGTTGATTCCATCAGAGCTTGTGGAAATGAAGCTTTCAAGAAGCAAGAACACAAAATGGCTCTCAGAAAGTATAAAAAAGCCGTGCGATATTTGGATGTATGCTGGGAGAAAGAAGGAATCGATGATGACAGAAGCATATCTCTTGGAAAGAAAAAGGCGCAGATATTCACAAACAGTGCTGCCTGTAAGTTGAAAATAGGGGATGCTAAAGGGGCATTAATGGACACGGAATTTGCTTTGAGGGATGGTGGAAACAATGCAAAAGCTTGGTTTCGCCAAGGTCAGGTTGGTCATTTCATCAACTTTATTTTATTAAAATTAAAACCAATTTCAGTTTCACTCTTCAAAATGATATTTAATTTTTGTGAATTGTAG 579 40.76 MGSSEVNRACSYRENDSPTLDVVIADCGEIKEGEDDGIGNFFKDGDVYPDWPADIDNGPVELSWWLDAVDSIRACGNEAFKKQEHKMALRKYKKAVRYLDVCWEKEGIDDDRSISLGKKKAQIFTNSAACKLKIGDAKGALMDTEFALRDGGNNAKAWFRQGQVGHFINFILLKLKPISVSLFKMIFNFCEL 192
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03338 192 SUPERFAMILY TPR-like 68 164 IPR011990 GO:0005515(InterPro)
Tamo4g03338 192 Gene3D Tetratricopeptide repeat domain 65 169 IPR011990 GO:0005515(InterPro)
Tamo4g03338 192 PANTHER PEPTIDYLPROLYL ISOMERASE 66 164 IPR050754 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03338 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr3:8615672 Tamo4g03338 Tamo-Chr4:64783209 wgd