AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03345 ATGCCGTCGCCGGCGGTCGATTTCAACTTCGACAGCACCAATTCTACTCCATACGTCACCGCACCTTCTACCCCACACCGCCTCCCCAATTTCTTTTACACCGCACCCACGAGCCCCATCCACTTCCTCGCCACCGCCTGTCAGGAAGATGATCATGAGGACGGTAACGATTTCGCATTCGATTTCACCGGACATCTGGAACCGCCTTCTATTTCCGCTGCCGACGAGCTTTTTCATTGCGGTAAGATCAAGCCATTAAACCCTGTCCTCGATGACACGCCCAAATCCTCAACCTCACGCTTCACACAGGCGTTTTCTCCTCGGTGTAAGAAGAAACATTTTGATGATTTCACTGAGGCTTTAAAGCAAACACCTTGTGATCAAACGGACACGAGTCAAAACCCATCTAAACGAGGACGGAAATCGACGTGTAAAACCAAAATTGCAGACAAAGTATCACCGTCGTCATCACCGTTCAGAATTTCCGATGTTTTATCCCAAGACGATAACAATCAGAGAAATTTAACAAATGGATCGGCATCTTTAACGTGGTACAATAAGTGGAACATCAAAAACCTGCTATTGTTTCGAAGTGCGTCGGAGGGGAGTGCGCGGAGGAGCAAAGATCCGGTGAATAAATACTCGAGGATAAAGAAAGGCGGTGATGCGGTTGAGGATATAAAGAATTCCAGCTTTAGAAGTGCAGAAAGTTTGGGGTCGAGTAGGAGGGTGATGAGGGCGGTGGCGGAAGAGATGAGGAAGAAGACGTTCTTGCCGTACAGGTCGGGGTTATTGGGGTGCTTGGGTTTTCATAACAATGGCGGAGAAAGTGTTCATGAGATTTCGAGAGGTATCACTTCCGTTATGAAGCAACGAGGATACTGA 885 48.02 MPSPAVDFNFDSTNSTPYVTAPSTPHRLPNFFYTAPTSPIHFLATACQEDDHEDGNDFAFDFTGHLEPPSISAADELFHCGKIKPLNPVLDDTPKSSTSRFTQAFSPRCKKKHFDDFTEALKQTPCDQTDTSQNPSKRGRKSTCKTKIADKVSPSSSPFRISDVLSQDDNNQRNLTNGSASLTWYNKWNIKNLLLFRSASEGSARRSKDPVNKYSRIKKGGDAVEDIKNSSFRSAESLGSSRRVMRAVAEEMRKKTFLPYRSGLLGCLGFHNNGGESVHEISRGITSVMKQRGY 294
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03345 294 MobiDBLite consensus disorder prediction 148 163 - -
Tamo4g03345 294 PANTHER OS07G0619500 PROTEIN 19 272 - -
Tamo4g03345 294 MobiDBLite consensus disorder prediction 125 139 - -
Tamo4g03345 294 MobiDBLite consensus disorder prediction 125 163 - -
Tamo4g03345 294 Pfam Protein of unknown function (DUF1645) 74 259 IPR012442 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03345 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
166078 Tamo1g04588 Tamo4g03345
166352 Tamo2g00199 Tamo4g03345
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr3:60692956 Tamo4g03345 Tamo-Chr4:64866344 dispersed
Tamo Tamo-Chr5:6084320 Tamo4g03345 Tamo-Chr4:64866344 transposed
Tamo Tamo-Chr1:109016423 Tamo4g03345 Tamo-Chr4:64866344 wgd
Tamo Tamo-Chr1:114323186 Tamo4g03345 Tamo-Chr4:64866344 wgd
Tamo Tamo-Chr2:4095021 Tamo4g03345 Tamo-Chr4:64866344 wgd
Tamo Tamo-Chr4:64866344 Tamo8g00475 Tamo-Chr8:6606664 wgd