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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g03368 ATGAGTTCGTTTATCAACTTCAGAAACTACGTCGACACATCGCAACCAGAGATCAATAACACATTGGGCGGAGGTGGGAAGGATTTCGGGTCGATGAACATGGATGAGCTATTGAAGAACATCTGGACTGCCGAAGAAACTCAATCAATGGCATCCACTTCAAATTTCGGAATCCCGAATAACGCGAATATACAAAGACAGGGATCGTTGACGTTACCCAGAACACTTAGCCAGAAGACTGTTGATGAAGTCTGGCGAGAGTTGCAGAAGAGTAACGGCGGAGGAAAAGGAGGCGATTTGATTGGAGAAATTAATTTACAGTCGGAGCAACGGGAACCTACTTTGGGGGAGATGACATTAGAGGATTTCTTAATGAAAGCAGGCGTCGCAACTGAAAACAATCAAATTCAAACCAATGAGAGATCTATGAACCCTCAAAACGTTCAAAACGGCTCGTATTTTGGTGATGTCTCAAAGAATGCTGAAAACAGTAGCTTCATTTTCGGGTTTCAAAACCCGAATCAAAACCATGGCTTTCAACCGCAAATCACAGAGAGTAAAAATGGACTTAACCTGCAACCAAATCCAAATCCGAATCCAAATCAAAAGACCCAGACTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCTCTGTTCCCGAAGCAGGCGGCGTTGGATTTCACGGCGCCATTGAATAGTAAATCTGAGAATCCGATGAAGATTAACGTGGTTCAAGCTAACGGCGTCGAGAATGGAATGATGAACCTGAAGAAACTCGGGGGTCTTGGTGCTGGATCTCCACGTAATTTGATCCCAAGAACCAACGTTGATTCAACTCCATCACCTCCATTTTATGCGTTTGATGAAGATGGTTTTCGCGGGCGGAGAAGCAGCGGGACTTTAGAAAAAGTGGTGGAGAGACGGCGGAGGAGAATGATCAAGAATCGAGAATCTGCTGCAAGATCTAGGGCTCGAAAACAGGCGTATACTCTGGAATTGGAAGCGGAAGTTGCAAAACTCAAAGAATTAAACCACGAATTACTGAAAAAACAGGAAGAGATCACGGAGATGCAGAGGAATCAGGTAGTGGAGAAGATGAAGCTGCCATGGGGGAGTAAAAGACTATGCTTACGAAGAACATTAACAGGGCCATGGTAG 1155 45.19 MSSFINFRNYVDTSQPEINNTLGGGGKDFGSMNMDELLKNIWTAEETQSMASTSNFGIPNNANIQRQGSLTLPRTLSQKTVDEVWRELQKSNGGGKGGDLIGEINLQSEQREPTLGEMTLEDFLMKAGVATENNQIQTNERSMNPQNVQNGSYFGDVSKNAENSSFIFGFQNPNQNHGFQPQITESKNGLNLQPNPNPNPNQKTQTQPQPQPQPQPLFPKQAALDFTAPLNSKSENPMKINVVQANGVENGMMNLKKLGGLGAGSPRNLIPRTNVDSTPSPPFYAFDEDGFRGRRSSGTLEKVVERRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKELNHELLKKQEEITEMQRNQVVEKMKLPWGSKRLCLRRTLTGPW 384
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g03368 384 FunFam BZIP transcription factor 304 357 - -
Tamo4g03368 384 MobiDBLite consensus disorder prediction 170 218 - -
Tamo4g03368 384 CDD bZIP-plant-BZIP46 311 360 - -
Tamo4g03368 384 Gene3D - 304 360 - -
Tamo4g03368 384 SUPERFAMILY Leucine zipper domain 306 355 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tamo4g03368 384 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 382 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Tamo4g03368 384 MobiDBLite consensus disorder prediction 201 217 - -
Tamo4g03368 384 SMART brlzneu 302 366 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tamo4g03368 384 Pfam bZIP transcription factor 306 357 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tamo4g03368 384 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 304 355 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tamo4g03368 384 Coils Coil 325 359 - -
Tamo4g03368 384 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 309 324 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tamo4g03368 384 MobiDBLite consensus disorder prediction 170 200 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g03368 K14432 ABA responsive element binding factor
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr1:127501754 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr3:21216301 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr3:57795576 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr4:7298875 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr4:11098378 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr4:15255346 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr4:18072028 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr4:69419738 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr5:11083131 Tamo4g03368 Tamo-Chr4:65251376 transposed
Tamo Tamo-Chr2:4381300 Tamo4g03368 Tamo-Chr4:65251376 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tamo1g00734 . 1 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 76.316 1.06e-66 199.0
Tamo1g01298 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 60.728 0.0 582.0
Tamo1g02729 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 74.699 1.10e-175 488.0
Tamo1g02901 . 309 440 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 28.105 3.11e-08 50.4
Tamo1g02967 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 66.962 5.95e-151 432.0
Tamo1g04511 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.852 9.58e-45 144.0
Tamo1g04820 ACH 184 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 47.863 1.00e-23 97.8
Tamo1g05757 . 29 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 46.552 5.37e-158 472.0
Tamo1g05854 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.537 2.40e-92 275.0
Tamo2g00137 ACH 15 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 46.203 9.37e-41 134.0
Tamo2g00213 . 234 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 45.455 7.61e-35 125.0
Tamo2g00599 ACH 42 273 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G42380 32.567 8.06e-21 90.1
Tamo2g00711 . 38 162 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.969 1.23e-38 126.0
Tamo2g00872 . 114 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 25.0 2.60e-15 72.8
Tamo2g00873 . 118 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 25.551 1.86e-12 64.3
Tamo2g00918 ACH 42 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 52.203 1.09e-85 257.0
Tamo2g02590 . 43 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 40.761 3.56e-18 81.3
Tamo2g02729 . 63 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 35.043 3.46e-19 80.5
Tamo2g03092 . 93 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 77.731 1.98e-134 380.0
Tamo2g03171 . 27 182 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 54.43 1.21e-47 160.0
Tamo2g03179 . 27 182 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 55.063 4.66e-48 161.0
Tamo2g03196 . 48 102 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 70.909 1.24e-23 92.8
Tamo2g04855 . 213 320 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 40.0 3.74e-16 75.9
Tamo2g05490 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.731 2.07e-112 330.0
Tamo3g00373 ACH 60 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 69.444 3.10e-50 156.0
Tamo3g00712 . 122 213 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 42.391 3.92e-18 75.9
Tamo3g00885 ACH 1 303 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 54.545 4.84e-92 274.0
Tamo3g01076 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 40.574 3.20e-36 129.0
Tamo3g02123 . 5 175 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 57.31 6.16e-46 157.0
Tamo3g03925 . 2 169 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 45.977 1.07e-34 124.0
Tamo3g04447 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 46.0 1.85e-87 266.0
Tamo3g04760 . 4 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 52.121 6.51e-44 143.0
Tamo4g00519 . 13 91 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G07160 37.5 6.79e-07 44.3
Tamo4g00520 . 37 94 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G07160 44.828 3.95e-06 43.5
Tamo4g00585 . 1 441 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 50.547 9.47e-110 328.0
Tamo4g00741 . 70 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 61.832 8.92e-163 461.0
Tamo4g00846 ACH 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 50.311 1.39e-84 254.0
Tamo4g00913 . 203 325 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 29.6 1.37e-14 69.3
Tamo4g01092 . 7 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 45.048 4.08e-63 200.0
Tamo4g01301 . 217 269 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 58.491 1.39e-12 61.6
Tamo4g02759 ACH 1 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 54.573 1.04e-99 295.0
Tamo4g03198 ACH 15 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.649 1.11e-41 136.0
Tamo4g03199 ACH 15 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.0 5.89e-41 135.0
Tamo4g03368 . 47 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 46.552 8.08e-85 263.0
Tamo4g03578 . 120 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 45.673 1.39e-37 132.0
Tamo4g03627 ACH 202 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 52.0 2.55e-24 97.8
Tamo5g00745 ACH 12 281 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 53.0 2.07e-86 260.0
Tamo5g01346 . 36 195 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 44.099 1.41e-30 112.0
Tamo5g01622 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 39.865 8.34e-76 238.0
Tamo5g01772 . 1 242 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 57.255 8.66e-89 261.0
Tamo5g01775 . 1 196 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 65.865 3.70e-92 269.0
Tamo5g01869 ACH 1 266 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 49.062 3.40e-67 218.0
Tamo5g02106 . 1 307 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 50.755 6.17e-95 282.0
Tamo5g03966 ACH 1 293 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 58.917 5.57e-103 305.0
Tamo6g00402 . 1 201 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 68.812 2.30e-76 233.0
Tamo6g01045 ACH 1 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 47.388 2.44e-123 369.0
Tamo6g01436 . 11 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 58.193 9.67e-157 450.0
Tamo6g01745 . 29 160 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 42.963 4.90e-26 96.3
Tamo6g01794 ACH 61 303 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.72 4.57e-85 255.0
Tamo6g01939 . 134 220 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 50.562 2.31e-18 75.1
Tamo6g02116 ACH 61 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 69.159 9.74e-48 150.0
Tamo6g03285 . 58 172 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G32150 78.814 1.40e-55 176.0
Tamo6g03836 ACH 11 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 50.9 8.48e-104 309.0
Tamo6g03868 ACH 11 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 50.9 8.48e-104 309.0
Tamo7g00049 ACH 12 127 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 48.062 1.18e-27 102.0
Tamo7g01822 . 42 127 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 59.302 1.28e-30 106.0
Tamo7g02538 . 49 251 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 54.067 2.76e-59 189.0
Tamo7g02621 . 1 201 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 67.464 8.29e-82 248.0
Tamo7g03026 . 135 314 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 40.838 1.04e-18 82.4
Tamo7g03027 . 139 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 39.247 5.76e-16 72.4
Tamo7g03379 ACH 3 244 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 50.0 8.61e-56 181.0
Tamo7g03634 . 113 320 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 27.962 2.13e-18 80.9
Tamo8g00099 ACH 3 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 46.608 3.99e-77 238.0
Tamo8g00392 . 38 162 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 52.756 4.95e-39 129.0
Tamo8g00895 . 42 127 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 60.465 1.01e-31 108.0
Tamo8g01230 . 37 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 35.484 1.55e-18 75.1
Tamo8g02139 . 56 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 59.93 4.10e-108 322.0
Tamo8g02227 . 112 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.354 2.07e-19 84.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Tamo bZIP_1 1.9e-12 CL0018 TF bZIP