Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tamo4g03370 | ATGGCGAATGTATCTTCTTCCTCCTCTCTTTACGCCCTTTTAACTCACCCTTCTCCTCCCGATAACCACTTCGCACCACGAACTTCCTCGTTTTCCTTCCCTCGACAAATTAATGGTTTCTCTGCTCTCTCTTTACGCCAATCCAAAAAGCTCCGAGTCCTCTCCATGCGACGCCAATCTAAAGCAACTGTGGTGTCTGGGCAATCATGGAACGCATCGGTTCTTGACAGCAAAACTGCAGTGTTGGTGGAGTTCTACGCCAGTTGGTGCGGACCATGTCAGATGGTGCACCGAGTGATTGATGAGATTGCCGGCGAGTACGCCGGAAAAGTCAAGTGTTATGTGCTGAACGCCGACCAAGACCCAGGAATTGCAGAGGAATACGATATCAAGGCTGTGCCGATTGTGTTGGTGTTCAAGAACGGTGAGAAGCGTGAGTCGGTGGTTGGGACGATGCCCAAAGAGTTCTATGTGGCCGCCATTGAAAGGGTCTTGGCTTCTTCATCTTGA | 510 | 50.39 | MANVSSSSSLYALLTHPSPPDNHFAPRTSSFSFPRQINGFSALSLRQSKKLRVLSMRRQSKATVVSGQSWNASVLDSKTAVLVEFYASWCGPCQMVHRVIDEIAGEYAGKVKCYVLNADQDPGIAEEYDIKAVPIVLVFKNGEKRESVVGTMPKEFYVAAIERVLASSS | 169 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tamo4g03370 | 169 | ProSiteProfiles | Thioredoxin domain profile. | 51 | 166 | IPR013766 | - | |
| Tamo4g03370 | 169 | SUPERFAMILY | Thioredoxin-like | 58 | 166 | IPR036249 | - | |
| Tamo4g03370 | 169 | PRINTS | Thioredoxin family signature | 81 | 89 | - | - | |
| Tamo4g03370 | 169 | PRINTS | Thioredoxin family signature | 129 | 140 | - | - | |
| Tamo4g03370 | 169 | PRINTS | Thioredoxin family signature | 89 | 98 | - | - | |
| Tamo4g03370 | 169 | FunFam | Thioredoxin | 56 | 168 | - | - | |
| Tamo4g03370 | 169 | Pfam | Thioredoxin | 64 | 161 | IPR013766 | - | |
| Tamo4g03370 | 169 | CDD | TRX-family | 73 | 162 | - | - | |
| Tamo4g03370 | 169 | ProSitePatterns | Thioredoxin family active site. | 82 | 100 | IPR017937 | - | |
| Tamo4g03370 | 169 | Gene3D | Glutaredoxin | 63 | 168 | - | - | |
| Tamo4g03370 | 169 | PANTHER | GEO12009P1 | 44 | 165 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tamo4g03370 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tamo | Tamo-Chr4:65289567 | Tamo8g00195 | Tamo-Chr8:3098709 | dispersed |