Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tamo5g03379	ATGGAAGAATCACAGGAGCCAGTTCTTCAATCCAACAACATAGAATCTAACAATGGGAATGGAAATGGGAATGGGAATGGGTATAGCTCAAGATTCAACTTAAATAACCGTGGGAGGCAGAACTTCATAGGACCTGGTTTTCCAGGGTTAAAAAAGCGAGGTCATGCACATGGAAACCGATCATGGATAAAAATAGAGGAAAATGGGAACTCAAAAGTGGTGGAATTAGATAAAGCAAGTGTAATGAGACAATGTTGTTTGCCAGCAAGAGATCTTCGCCTTTTGGATCCTCTTTTTATATATCCTTCAACAATATTAGGGCGTGAGAAGGCGATTGTTGTGAGTCTTGAGCAGATTAGATGTATAATTACAGCTGATGAAGTGTTTCTTATGAATTCACTTGATGCCTCTGTGGTTCAATATAAGTCTGAATTGTGTAAACGCCTTCAAGAAGAGAAATGTCATTCAGCTGTTCTTCATCCAGATGACCTACCATTTGAGTTTAGGGCACTGGAACTAGCTTTGGAATTTACCTGCCTTGGTCTTGACACTCAGGTTAAAGAATTGGAAATGGAAATTCATCCTGTACTTGATGAACTAGCAAAATCCATAAGCACCCTGAATCTTGAACGTGTTCGTAGATTCAAAGGCCACCTTCTAGCATTGACTCAACGTGTGCAAAAGGTACACAAAATTATTAAATTAAGTATCGCGACTTCAATAACGGGGCCCGTATTGGGAGTCATGTCAAAATCCGCCCCGGTTTCTCCCGTGGGGTCCGCAAGTGGCTCGCAGAGATTGCAAAGGGCGTTTAGTAATATAAGTGCACATAAACACGGAAGCTTGTTGAGTTCGTCTGTCACTGGTGAAACCGAAAACATTGATCAACTTGAGATGTTGCTCGAAGCTTACTTTGTTGGAATCGACAACACTTTAAATAAATTGCTTTCCGTAAGATAA	960	40.73	MEESQEPVLQSNNIESNNGNGNGNGNGYSSRFNLNNRGRQNFIGPGFPGLKKRGHAHGNRSWIKIEENGNSKVVELDKASVMRQCCLPARDLRLLDPLFIYPSTILGREKAIVVSLEQIRCIITADEVFLMNSLDASVVQYKSELCKRLQEEKCHSAVLHPDDLPFEFRALELALEFTCLGLDTQVKELEMEIHPVLDELAKSISTLNLERVRRFKGHLLALTQRVQKVHKIIKLSIATSITGPVLGVMSKSAPVSPVGSASGSQRLQRAFSNISAHKHGSLLSSSVTGETENIDQLEMLLEAYFVGIDNTLNKLLSVR	319

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tamo5g03379	319	Gene3D	Magnesium transport protein CorA, transmembrane region	135	319	-	-
	Tamo5g03379	319	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	47	319	IPR039204	GO:0015095(PANTHER)\|GO:0015693(PANTHER)
	Tamo5g03379	319	Gene3D	-	51	133	-	-
	Tamo5g03379	319	Pfam	Magnesium transporter MRS2-like	67	234	-	-
	Tamo5g03379	319	FunFam	Magnesium transporter MRS2-1	49	133	-	-
	Tamo5g03379	319	CDD	Mrs2-Mfm1p-like	62	319	IPR039204	-
	Tamo5g03379	319	MobiDBLite	consensus disorder prediction	1	31	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tamo5g03379	K16075	magnesium transporter

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	5368991	Tamo	Tamo5g03379	Tamo-Chr5:78452435	Tamo7g04229	Tamo-Chr7:85905900
	5386477	Tamo	Tamo5g03379	Tamo-Chr5:78452435	Tamo1g04687	Tamo-Chr1:111106379

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tamo1g01375	.	123	459	MRS2 gene family	AT5G22830	76.331	2.71e-175	497.0
	Tamo1g02820	.	1	386	MRS2 gene family	AT5G09690	65.979	2.66e-176	493.0
	Tamo1g04687	ACH	47	483	MRS2 gene family	AT3G19640	59.865	4.99e-169	482.0
	Tamo1g04688	.	47	484	MRS2 gene family	AT3G19640	67.253	0.0	564.0
	Tamo2g00300	ACH	47	484	MRS2 gene family	AT3G19640	62.031	1.02e-180	514.0
	Tamo2g03434	ACH	1	483	MRS2 gene family	AT3G19640	57.873	4.37e-170	485.0
	Tamo4g00224	.	136	385	MRS2 gene family	AT5G09690	72.0	2.01e-120	347.0
	Tamo4g03626	.	1	436	MRS2 gene family	AT3G58970	65.171	0.0	566.0
	Tamo5g03379	.	26	331	MRS2 gene family	AT2G03620	59.365	1.26e-108	321.0
	Tamo6g00151	.	230	332	MRS2 gene family	AT2G03620	54.237	1.48e-20	83.2
	Tamo7g00018	.	133	235	MRS2 gene family	AT1G80900	71.154	2.41e-43	146.0
	Tamo7g04229	.	1	443	MRS2 gene family	AT1G80900	76.471	0.0	668.0